Prosopis cineraria: 129317982
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Entry
129317982 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pcin
Prosopis cineraria
Pathway
pcin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129317982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129317982
03036 Chromosome and associated proteins [BR:
pcin03036
]
129317982
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129317982
Chromosome and associated proteins [BR:
pcin03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129317982
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
129317982
NCBI-ProteinID:
XP_054818416
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MSPGAGCVMECNTGGVPDSCILFNCQKRGVSENIVTSSSEIMRDILHCLPILNSSDYYMK
PSLEELLTQELRDPGYCSRVPDFTIGRFGYGSVRYLKNTDVRGLNLEEIVKIRKHEIIVY
NDEIDKPAVGQGLNKEAEVVLILDSRSLKSKECQGNDLLSKLKQSAERQGAQFISFDPVT
GEWRFLVEHFSRFGFSEXDEEDVVMDDSAAVQDPDQMDDAEIYDDKETPNFDEVELSHSL
PAHLRLDPVKMREMRLLMFPDEDEADELSQKSSLGKEHARPLHNSAHPVSYRSSPPGPRK
IPLALLEYKHGSFDSSPPGAILMAQQHKGMPLRTIKAGFKLDMKHETPISGNYARNIVDA
GLFMGRSFRVGWGPNGILVHTGAPVGSDRDPRVLSSVVNLEKVAFDKVVRDENDKVNEEL
VDFVFDTPLNFHKGINHAMKEVHVGACKLRFQKLEANRTMLSEISHGYCDIIERQLAVPG
LSSSARLVLTHQVMAWELIRVLFSDRQQKGQVESLGADNEEDMMQDTKEVGRDIEPEALP
LMRRAEFSYWLQESVSYHVQNQISSLNETDYLQNIFVLLTGRQLDAAAQLAVSRGDVRLA
VLLSQAGGSTLNRLDVARQLDLWRINRLDFSFIEKSRLRLYELIAGNIHGALFDVSLDWR
RFLGLLMWYQLPPDSSMPIIFETYKHLLDKGRAPYPLPLYIDEVPPNEAINWNSNNHFDL
SFYLMLLHASQETDFSFLKSMFSALSSTPDPLDYHMIWHQFAVLEAVGVISSNDLHILDM
GFVSQLLCSGKCHWAIYVVLHLPYCHDYPYLHVNLIREILFQYCETWGSDTSQRQFIENL
GIPLEWLHEAMAIYYNYHGDLSKSLEHFLECANWQKAHSVFVTSVAHKLFLSAKHTEIWR
IATSMEGHKSEIDNWEFGAGVYISFYLMRNSLQEDNSMTELDSLQSKNAACRDFISQLNE
FLAFWGSRLPVDARMVYSKMAEEISDLLLSAVGEGTTRNDQLSCFDTVSKAPIPEDLRSR
HLQDAVSVFTCFLSEVATT
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctggtgctggctgtgtgatggaatgtaacacaggaggggtacctgattcatgc
attctatttaattgccagaaaagaggggtttctgaaaatattgttacttcatcaagtgag
ataatgagggatattctacattgcctgcctatattgaactcatcagattattatatgaaa
ccatctcttgaggagttattgactcaggagctccgagatcctggttattgtagccgtgtt
cctgatttcaccattgggagatttggttatggatctgtcaggtatcttaagaacactgat
gttaggggtttaaatctagaggaaattgtgaagattcgtaagcatgagataattgtatac
aacgacgaaattgataagccggcagttggtcagggccttaacaaagaggctgaggtagtt
ctgatactagacagtagatcattgaagtctaaggagtgccagggaaatgatttactaagt
aaattaaaacagagtgctgagagacaaggagcacaatttatatcctttgatccagtgact
ggtgaatggagattcttagttgaacactttagtagatttggatttagtgaangggatgaa
gaagatgtggttatggatgattctgctgcagttcaagatcctgatcagatggatgatgct
gagatatatgatgataaagaaacaccaaatttcgatgaagttgaactatctcattctctt
cctgcacatcttaggcttgacccagtaaaaatgagagaaatgagattactgatgtttcct
gatgaagatgaagcggatgaattaagtcagaaatcatctcttggtaaagagcatgcaaga
cctttacacaactctgcccatcctgtgtcctatagatctagccctccaggtccacgaaaa
attccactggcactgcttgaatataaacacgggagttttgattcaagccctcctggagcc
attctgatggctcaacaacataaagggatgcctcttagaacaattaaagcaggttttaaa
ctagatatgaaacatgaaactccaatatctggaaactatgctcgcaacatagttgatgct
ggcttattcatgggtaggtcatttcgagtaggttggggaccaaatggcattcttgtacat
acaggtgcacctgtaggaagtgatagagatcccagggtattgtcatctgtggtcaacttg
gagaaagttgcttttgataaagtggttagggatgaaaatgacaaagtgaatgaggagctt
gtggactttgtgtttgatactccattaaattttcacaagggaataaaccatgccatgaaa
gaagttcatgtaggggcatgcaagctgaggtttcaaaagctggaagctaatcgtacaatg
ctctcggagatttctcatgggtactgtgatatcattgagaggcaattggctgttcccggg
ttatcttcttctgctcgattggttttgacacaccaagtaatggcctgggaattgatcagg
gttcttttttctgatcggcaacaaaaaggacaagtggaatctttgggtgctgataatgag
gaagatatgatgcaggatacgaaggaagttggtcgagatattgagccagaagcactccct
cttatgagaagggcagagttcagttattggttgcaagagagtgtttcctatcatgttcaa
aatcaaataagctctttgaatgaaactgattatctacaaaatatttttgtcctcctgact
gggaggcagctggatgctgctgcgcaattggctgtgtccagaggagatgtaaggttggct
gttttgttaagtcaggctggtggttcaactctgaatcgtttggatgttgccaggcaactt
gatctttggagaatcaataggctggattttagtttcattgagaagagcagattaaggctt
tatgagttgatagcagggaatatacatggtgccttgtttgatgttagtcttgattggagg
aggttcttgggtttattgatgtggtaccaattaccgcctgattcatcaatgcccattatt
tttgagacttataaacatcttcttgacaaaggaagggctccatatcctcttcctctttat
attgatgaagtacccccaaatgaggcaatcaactggaactcaaataatcactttgatctg
tcattttatctcatgcttcttcatgccagtcaggagacagatttcagctttctgaagtcc
atgttcagcgccctttcttcaacccctgatccacttgattatcatatgatctggcatcaa
tttgcagtcttagaagcagttggtgttatcagttccaatgatcttcatattctagacatg
ggatttgtgtctcagttgttgtgttcagggaaatgccactgggccatatatgtggtcctt
cacttgccctattgtcatgattacccatatcttcatgtaaatctgatacgagaaatattg
ttccagtactgtgaaacttggggttctgatacttctcaacgtcaattcattgagaacttg
ggcattcctttggaatggctacacgaggctatggcaatttattacaactatcatggagat
ctctcaaaatctcttgagcactttcttgagtgtgcaaattggcagaaagcacattctgtt
tttgtaacttcagttgctcataaattattcttgtctgctaaacacacagagatatggagg
attgcaacttccatggagggtcataaatctgaaattgataactgggagtttggtgctggg
gtttatatttcattctatcttatgaggaattcacttcaagaagacaattctatgactgaa
ttggattctcttcagagtaaaaatgctgcttgtcgggattttatcagtcagctaaatgaa
ttcttggctttttggggttccagattacctgttgatgctaggatggtatattcaaagatg
gcagaagagatatctgatctgctgctatcagctgtcggtgaaggcactactcgcaatgat
cagttaagttgctttgacacagtctccaaggctccaattccagaagaccttcgctcaaga
cacttgcaagatgctgtgtctgtgttcacttgctttctttcagaggtggcaacaacatag
DBGET
integrated database retrieval system
