Prosopis cineraria: 129318087
Help
Entry
129318087 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA splicing factor SR-like 1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
pcin
Prosopis cineraria
Pathway
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129318087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcin03041
]
129318087
Spliceosome [BR:
pcin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
129318087
Complex C
U4/U6.U5 tri-SnRNP related factors
129318087
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
129318087
NCBI-ProteinID:
XP_054818604
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MEIQTCGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAIGFLYLRYVADPKSLWNWFEPYVK
DEEEFSPGSNGRMTKMGVYIRDLLLGQYYFDTLFPRIPVPVMRQVVSNLEKLKLPTTHSG
STGECTATRHGSDETARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPGPSHERNGS
EERRSPSSRRSGSHEYYERDQERERDRDRSRSRDRNRVRDYDRDRDRERERDRXRYCDRD
RDRERDRDRRTGRERDRERSYDYDRRSKYGERESSRDYDYRRHDGSRHYRSQSRSRSRSR
SQSLQAGPARLETHSSPQRDGGKDKTSASSNLAKLKDIYGDLSDNKRDANTERIPGRDNG
GEEVIRLGGSTWKY
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggagatacaaacctgtggcaagccaatagattctctacttgagaaagtcctttgcatg
aatattttatcgtctgattatttcaaggagctctatcgattgaagacataccatgaagtt
attgatgagatttacaatcaagttgatcacgtggagccttggatgacaggaaactgtcgt
ggtccttcaactgcattctgtcttctttacaagttttttactatgaagcttactgtcaaa
caaatgcatggactgttaaaacaccctgattctccttacataagagctattggctttctc
tatttgagatatgttgctgatccaaagagtctgtggaactggtttgagccctatgtgaaa
gatgaagaggaattttctcctggatctaacggacgcatgacaaaaatgggtgtatatatc
cgtgacttactccttggacagtactacttcgacacactctttccccgcatccctgttcct
gtaatgcgacaggttgtatcaaatctcgagaaattgaagctccctaccacgcattctggt
tcaactggggaatgcaccgccacccgccatggttctgatgagactgcccgcagacctcct
tctgtgaaagctgccctctcagtctcatttggtcagcgggctccacatcgtgcttcgaca
agggactcatcccctgttcgccgaactttacctggtccatctcatgagaggaatggcagt
gaagaacgaagatctccaagcagccgacgcagtggaagccatgaatattatgaaagggat
caggagagggaaagggaccgtgatcgctctcgatctagggacagaaacagggttcgggat
tatgatagggacagggaccgggagagggagagggacaggngaaggtactgtgatcgggat
agagatcgagagagggatagagacaggaggacagggcgagagagggatagagagcggagt
tatgattatgataggaggtctaagtatggagagagagaaagtagccgtgattatgactac
agaaggcacgatggtagtaggcactatcgcagtcagagcaggagccggagtaggagtaga
agtcagagcttgcaagctggcccagctcggttggagacccattctagtccacagagggac
ggaggcaaggacaagacatcggcttccagtaatctagctaaactaaaagatatttatggt
gatttaagtgataacaaacgtgatgccaacactgaaagaattcctgggagggataacgga
ggcgaagaggtaattagactcggtggttccacctggaaatactga
DBGET
integrated database retrieval system
