Prosopis cineraria: 129318242
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Entry
129318242 CDS
T09047
Name
(RefSeq) pre-mRNA-processing protein 40A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pcin
Prosopis cineraria
Pathway
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129318242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcin03041
]
129318242
Spliceosome [BR:
pcin03041
]
Complex A
U1 snRNP components
U1 related factors
129318242
Complex B
129318242
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
129318242
NCBI-ProteinID:
XP_054818875
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MANNSQPPSMQPLPPTAVGSFVPQSFGSSLSQFRPMMPAQQGQQFAPTAPQQFGSVGQGI
SSSNVGMPVVQSQHLQYSQPMQQLNPRPIQPTHPAPYIQTSRALTSAPPQSQQTVPHLGN
HVHGLAVSGAPPHSSYTFTPSYGQQQDNANSVTQYQAPHQMSAPTGGQPWMFSVSQTPTV
PPVQQSGLQSSGTTPMDAAINGPSQNSSSDWQEHTSADGRRYYYNKRTRQSSWEKPLELM
SPIERADASTVWKEFTSPEGRKYYYNKVTQQSTWTIPEELRLAREQAQKASNSGVKSERN
DTSNAADGSLAATSAPTATNASSSNTSTSSGIVTSPAPVTPVVASTDPPHLAAIPVSHST
VTSSASGVEPSVVADLNAAPTTVAGRSGVAANMHNSNASSTIENQAFQDAVTSTNGASLQ
VMEETKKGMALAGKINVNPPEEKTNDEEPMVYANKLEAKNAFKALLESANVQSDWTWEQT
MREIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKAREEFSKMLEECKELT
SSTRWSKAVTMFENDERFKAVERAREREDLFESYMVELERKEKEQAAEEHRWNVAEFRKF
LESCDFVKVYSQWRKVQDRLEDDERCMRLEKIDRLLVFQDYVRELEKEEEELKKIQKDQL
RRSERKNRDAFRKLLEEHVASGILTAKTHWREYCMKVKDLPQYQAVASNTSGSTPKDLFE
DVVEDLAQKYHEDKTLVKDTVKLGKIAVDTTTAFEDFKAAVLEEVDPPSMSDINLKLVYE
ELLERAKEKEEKEAKKRQRIADEFTKLLYTFKDITASSKWEDCKPLFEEAQEYRSIGDES
SSREIFEEYIAYLKDKAKEKERKREEEKAKKEKEREEKEKRKEKEKEKKDKERERENKER
HKKDETDSENLDISDSHGYKEDKKKEKDKERKHRKRHLSSAEDADSEKADKEESKKSRRH
GSDRKKSRKHANSPESENETRHKRHRRDYRDGYRKASGHVELEDGELGEDGETE
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggccaataattctcagccccccagcatgcagcctcttccacctacagcagttggatcc
tttgttcctcaaagttttggttcatccttatctcaatttcgaccaatgatgccagcccag
caagggcaacaatttgcaccaacagctccacaacaattcggatctgtaggacaaggtatt
tcttcttcaaatgttgggatgcctgttgtccaaagccagcacttgcagtattctcaacct
atgcaacaattgaatcctagaccaattcagcctactcatcctgcaccatatattcagaca
agcagggcgctgacatctgctccaccgcaatcacagcaaactgttcctcatttaggcaat
catgtgcatgggttggctgtttctggagcacctccgcattcttcatatactttcacgcca
tcttatggccagcagcaagataatgctaattcagtgactcaataccaggctcctcatcag
atgagtgcacctactggaggacaaccttggatgttttctgtatctcagactccaactgta
ccaccagtgcagcagagcgggttacaatcatctggtactacgccaatggatgctgcaata
aatggccctagccagaattcatcctctgattggcaagagcacacttcagctgatgggaga
agatattactacaacaagaggacaagacagtctagttgggagaaacctttggagctaatg
tcacctatcgagagggcagatgcttcaactgtttggaaggagtttacttctcctgaggga
agaaaatactattacaacaaggttacacagcaatctacgtggaccataccagaggaatta
aggctggctcgtgaacaggcacaaaaagctagtaactcgggagtgaagtcagaaagaaat
gatacatccaatgctgctgatggctccttggccgcaacttcagcacccacggccactaat
gcttctagctctaatacttcaacatcatctgggattgttactagcccagctcctgtcact
ccagtggttgcttcgactgatcctccccatttggctgcaatccccgtttcccactctaca
gttacttcaagtgccagtggggttgaaccaagtgtggtggcagatttgaatgctgcacct
acaacagttgcaggaagatcaggagtagctgcaaatatgcacaattctaatgcttcatcc
actattgaaaatcaagcatttcaggatgctgtcacttccacaaacggagcttctcttcaa
gttatggaggaaaccaaaaagggaatggctttggctggaaaaatcaatgtcaatccacct
gaggagaaaacgaatgatgaagaacccatggtatatgcaaataagctggaggcaaaaaat
gcattcaaagcccttcttgaatctgcaaatgttcagtctgattggacatgggaacagaca
atgagagagatcatcaatgacaaaagatataatgctctaaaaacacttggtgagcggaag
caagcttttaatgagtacttgggccaaaggaagaagctagaggctgaagagaggcgtatg
aggcagaaaaaggctcgagaagagttttcaaagatgctggaggagtgcaaggagcttaca
tcatctactagatggagtaaagctgtaaccatgtttgagaatgatgaacgatttaaggct
gttgaacgcgctagagaacgggaagatctatttgaaagctacatggtggaacttgagagg
aaggaaaaagaacaagctgccgaagaacacaggtggaatgttgctgaattcaggaaattt
ctggaatcctgtgactttgtgaaggtgtatagtcagtggcggaaggtccaagatcggtta
gaggatgatgaaagatgcatgcgtcttgaaaagatagatcgcttgcttgttttccaggac
tatgttcgtgagttggaaaaggaagaggaggagcttaaaaaaatacaaaaggatcaactc
cggcggtctgaaaggaaaaaccgtgatgcatttcggaagttattggaagaacatgttgct
tctggaattcttactgctaaaacacactggcgagaatattgcatgaaggtcaaggatttg
cctcaatatcaagctgttgcatcaaacacatctggttcaactccaaaagacttatttgaa
gatgttgttgaggatctcgctcaaaagtatcatgaagacaagacgctggttaaagataca
gtgaagttaggcaagattgctgtagatactacaacagcgtttgaggactttaaggctgct
gtcctggaagaggttgatcctccatcgatgtctgacattaatctgaagcttgtatatgaa
gagttattggagagagctaaggaaaaggaggagaaagaagctaagaagcgtcaacgcatt
gctgatgaatttactaagctgttatatacatttaaggatattactgcttcttccaaatgg
gaggattgcaagccactttttgaggaggcgcaagagtacaggtcgattggtgatgagagc
tccagtagggagatttttgaggaatacatagcttacttgaaggacaaggctaaagagaag
gagcgcaagcgggaagaggaaaaggccaagaaggagaaagaaagagaagagaaagagaaa
cggaaagagaaagaaaaggagaagaaagacaaggaaagggaacgtgagaacaaggaacga
cataagaaggacgaaactgatagtgagaatctagacataagtgacagtcatggttacaag
gaggacaagaaaaaagaaaaggataaagaaaggaaacatcggaagaggcatctaagtagc
gcagaggacgcagactctgaaaaggctgacaaggaagagtcaaagaaatcacgaagacat
ggcagtgaccgcaaaaagtctaggaagcatgcaaactcacctgaatctgaaaatgaaact
cggcataaaagacacaggagggattaccgggacggttataggaaagctagtgggcatgtg
gaactcgaagatggcgagctcggcgaagatggcgagaccgagtaa
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