Prosopis cineraria: 129318729
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Entry
129318729 CDS
T09047
Name
(RefSeq) uncharacterized protein LOC129318729 isoform X1
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pcin
Prosopis cineraria
Pathway
pcin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129318729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129318729
03400 DNA repair and recombination proteins [BR:
pcin03400
]
129318729
Enzymes [BR:
pcin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
129318729
Messenger RNA biogenesis [BR:
pcin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
129318729
DNA repair and recombination proteins [BR:
pcin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
129318729
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Utp25_C
Helicase_Sgs1
PTEN2_C2
AAA_9
Motif
Other DBs
NCBI-GeneID:
129318729
NCBI-ProteinID:
XP_054819633
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MESVLKKYFGFSEFRPYQKDVIEKILEKRDCLVVMATGSGKSLCYQIPPLVARKTGIVVS
PLISLMQDQVMGLRQRGIRADYLGSAQTDPTVQSKAESGQFDILFLTPEKACLIPTSFWL
NLLKAGICLFAVDEAHCISEWGHDFRVEYKQLDKLRGVLSGVPFVGLTATATEKVRVDII
SSLKMCNPYVSVGSFDRANLFYDVKPFNPGQHFVNELVQEILKKVATGGSTIIYCTTIKD
VEQISKSLLEAGVAAGIYHGQMSKKSREESHRLFVRDELQVMVATVAFGMGIDKPDIRQV
IHYGCPKSLESYYQESGRCGRDGIASVCCLYYTRSDFTKGNFYCGELQTEKQRKAVMESL
MAAERYCLLTTCRRKFLLEYFGEKVSANRCGNCDNCIVSKKQRDMSTEVFLLLACIQSCG
GKWGLNMPIDILRGSRAKKILDSQFDKLPLHGLGKAHPLNWWKALGHQLISHGYLKETVK
DVFRTVSVSSKGEQFLASSTPDYQPPIVLSVTSEMLDDEENRSAPEEFKSLAPSDAEGFS
EAEGQLYKMLLEERMKLARIVGTAPYAICGDQTIKKIALTRPSTKARLANIDGVNQHLVT
KYGDHFLQVIQQLSQGLRLSLDGEASLQAPPVRKVSTVRLTNESKKLTPAKFEAWKLWHE
DGLSIQMIANFPGRSAPIKEQSVAEYLLEAAQEGLPFDWNRFCEMVGLKSEIILEIQGAI
LKVGSTEKLKPIKNELPEDVSYVHIKTYLAMRNAGISLEGTQDGSSPAEKADELVREASD
LSQNRLDTGNMEINGEIDLSLKSPVKRSGPDKDEESTGPANGCQAQNLQLVCEELTNKRQ
KVGELNEENPCKLKATENSLFEWLKNHEGATLNDILNHFNGSSEDSVVELLSCLEGEFFI
YKKNSMYRLM
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggttctgaagaaatacttcgggttttccgagtttcggccgtatcagaaggat
gtcatcgagaaaatattggagaaaagggattgcttggtagtcatggctactggcagtggg
aagtccctttgctatcagatacctccattggttgctagaaagactgggatagttgtcagc
cctcttatctcattaatgcaagaccaggtaatgggtttaagacaacgggggatcagagca
gattatcttggaagcgcacagactgaccccactgtccagtctaaagctgagagtggccaa
tttgacattctgttcttgactcctgagaaggcgtgcttaattcctaccagcttctggttg
aacttgctgaaggcagggatttgtctttttgctgttgacgaggcacattgtatatcagaa
tgggggcatgattttagggtggaatacaagcaactagacaagttacgtggtgttctatct
ggtgtcccttttgttggcctaactgcaactgctactgaaaaggttcgagttgacatcatc
agttccttgaagatgtgcaatccttatgtttcggttggttcatttgatcgcgccaatctt
ttctatgatgtcaagccttttaaccctggacaacattttgtaaatgagcttgtccaagag
attttgaaaaaagtagctactggtggttcaactataatctactgcacaacaatcaaagat
gtagagcagatttccaagtcacttttggaagcaggtgttgcagctgggatatatcatggg
caaatgagtaaaaaatctcgtgaggaatctcatagattgtttgttagagatgaactgcaa
gtgatggtagcaactgttgcttttggtatgggtatagataagccagacataaggcaggtg
attcactatggttgcccaaaaagcctggagtcctactaccaggaaagtgggcgatgtggt
cgagatggtatagcttctgtttgttgcctttactacacgagaagtgacttcacaaagggc
aacttttattgtggagaattacaaacagaaaagcaaagaaaagctgtcatggaatcatta
atggctgctgaacgctattgcttgctgacaacttgcagaagaaagttcttgcttgaatac
tttggggaaaaagtttcagctaatagatgtggaaactgtgataactgcattgtctcaaag
aagcaacgagacatgtcaacagaagtatttcttctactggcttgcattcaatcatgcggg
gggaaatggggcctgaacatgcccattgacatcctgcgcgggtctcgagccaagaaaatt
cttgattctcagtttgacaagcttcctcttcatggtcttgggaaagctcacccattaaat
tggtggaaagcactaggacatcaattaatttctcatggttatctgaaggaaactgttaaa
gatgtgttcagaactgtgagtgtcagttcaaaaggagagcaatttctagcctcttctaca
ccagattatcaaccaccaatagttctgtcagtgacttctgaaatgcttgatgacgaggaa
aatagatctgccccagaagaattcaaaagtttagccccttcagatgctgaaggtttttca
gaggctgaggggcagctctacaaaatgcttttggaagagagaatgaaacttgcaagaatt
gttggaacagctccatatgccatttgtggcgatcaaacaatcaagaaaattgcactgaca
agaccatctacaaaagcaaggctagcaaacattgatggtgtgaatcagcacctggtaacg
aaatatggagatcattttcttcaagtgattcaacaattgtcgcaaggattgagactttca
ctggatggagaagcaagcttgcaagctcctccagtaaggaaagtgtccactgtaagatta
actaatgaatcaaagaagttgacgccagcaaagtttgaagcctggaaactgtggcacgaa
gatggtctttctatccagatgattgctaactttccaggtagatcagctcctataaaagaa
cagtctgttgctgaatatctactggaagctgcacaagaaggattgccttttgattggaat
agattttgtgagatggttggactgaaatctgaaatcatcttggaaattcagggtgctatt
ctaaaggttggatctacagaaaaattgaagcctataaaaaatgagttaccagaagacgtt
agctatgtacacatcaagacttatttggcaatgaggaacgctggaatatctcttgaaggc
actcaggacgggagcagtccggcagagaaagctgatgaactcgtgagggaggcatcagat
ttatctcagaatcgattagatacaggcaacatggaaataaatggggaaattgacttgtct
ttgaagagtccggtgaaaagatctggcccagataaggatgaggaatcaactggacctgcc
aatggttgccaggcacagaatcttcaattagtctgtgaggagttgactaacaaacgtcaa
aaagtgggtgaactaaatgaagaaaatccttgcaaattgaaggcaacagagaattccttg
tttgagtggctgaagaaccatgaaggagctacattgaatgatattctgaaccacttcaat
gggtccagtgaagattctgtggtggaactactgagttgccttgagggtgagttttttatc
tataagaaaaatagcatgtacaggcttatgtga
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