KEGG   Prosopis cineraria: 129318790
Entry
129318790         CDS       T09047                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
pcin  Prosopis cineraria
Pathway
pcin03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pcin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    129318790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcin03021]
    129318790
   03036 Chromosome and associated proteins [BR:pcin03036]
    129318790
Transcription machinery [BR:pcin03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     129318790
   Coactivators
    SAGA/TFTC/STAGA complex
     129318790
Chromosome and associated proteins [BR:pcin03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     129318790
    STAGA complex
     129318790
    TFTC complex
     129318790
    SAGA complex
     129318790
    SLIK complex
     129318790
SSDB
Motif
Pfam: WD40 WD40_Prp19 TFIID_NTD2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_SPT8 Ge1_WD40 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 WD40_like Beta-prop_NUP159_NUP214 WD_LRWD1 Beta-prop_VPS8 PALB2_WD40 LisH Cytochrom_D1
Other DBs
NCBI-GeneID: 129318790
NCBI-ProteinID: XP_054819716
LinkDB
Position
Unknown
AA seq 669 aa
MDEDQILGFVTTYLRKKGFTQTEHAFQEELQQNKNTSSANSLIEPDIAKHILAFSKLESG
PARFHDGYSRLRSWAYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHIQEARNFFNTFRED
HDMMHLRDLQKLEGVLSPSHLEEMEFAHSLRQIKFNIKICEYSYELLLQHLHSTQSTTIL
GIINEHIDFQVTPGQPSSISDDPEAVTLAGSSQDAANQINQKEIHWGLLEDSLEERLEKA
GALLSDSEKGEGEAKEGENEENKKRSIEGGKQGASIKKVKKDKGGTASGKSAKPDANTVP
AAPRVKPELPLPIIPTEVEQSILEDLRNRVQLSSVALPSVSFYTFLNTHNGLSCSSISHD
GSLVAGGFSDSSLKVWDMAKLGQQTVSSLSQGENDSSQNEQILGQSGGRRQYTLFQGHSG
PVYAASFSPVGDFIISSSADSTIRLWNTKLNSNLVCYKGHNYPVWDVQFSPVGHYFASAS
HDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRI
FIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLSSGSCLTPLVGHTSCVWTLAFSCEGT
LLASGSADSTVKLWDVTTSAKLPRTDEKSGNTNRLRSLKTLPTKSTPVSSLRFSRRNLLF
AAGALARSG
NT seq 2010 nt   +upstreamnt  +downstreamnt
atggacgaagatcaaattctgggatttgttactacgtacctgaggaagaaagggtttacg
caaacagagcacgcatttcaggaggagctgcaacagaataagaacacttcctccgctaat
tctcttatcgaacctgacattgccaagcacatccttgccttctccaagttagaaagtggt
cctgcaagatttcatgatgggtatagcaggctcagatcatgggcatatagttcattggat
ttgtacaagcatgaattattgcgtgtgctttatccggtgtttattcattgttttatggat
cttgtggcaaaagggcatattcaagaagctcggaacttttttaataccttccgtgaagac
catgatatgatgcacttacgagaccttcagaagttggaaggtgttctttctccttctcat
ctggaggaaatggaattcgctcattcccttagacagatcaaatttaacataaagatatgt
gagtattcctatgaacttctattgcaacatctccacagtacgcagtccaccaccatactt
ggtataattaatgagcatattgacttccaagttactcctggacaacctagctcaatttct
gatgatccagaggctgttactcttgctggaagcagccaggatgcagcaaatcagataaat
cagaaagaaatacattgggggttgcttgaagactctctagaagaacgcctggagaaggct
ggtgctttgctttcagattctgaaaagggggaaggggaagccaaagaaggggagaatgaa
gagaataagaaaagatcaattgaaggaggaaagcaaggtgcttcaatcaagaaagtaaag
aaggacaagggtgggactgcatcagggaaaagtgcaaaacctgatgctaatactgtgcct
gcagcgccacgtgttaaaccagaactccccttgcccataattccaacagaagtagagcag
tctatccttgaagatttaaggaaccgtgtacaattgagtagtgttgcactgccttcagtt
agcttttacacgtttctcaatacgcataatggtttaagctgctcatcaatatcccatgat
ggttcattggttgctggagggttttctgactcatcactgaaggtttgggatatggcaaag
cttggacaacagactgtcagttctctttcacagggtgagaatgactcatctcaaaatgaa
caaatacttgggcaaagtggtgggagaagacagtatacattatttcaaggtcattcaggg
ccagtttatgcagccagttttagtcctgttggggattttattatttcctcttcagcagac
tcaactattagattatggaacacaaagcttaattcaaatcttgtttgctataagggccac
aactaccctgtctgggatgttcagtttagtcctgtggggcattattttgccagtgcttca
catgatagaactgctagaatttggtccatggacaggatacagcctttaagaataatggca
gggcatttgtcagacgttgattgtgtgcaatggcatgccaactgcaactacattgctact
ggctccagcgacaaaacagttcgattatgggatgtgcagagtggggagtgtgtccggatt
ttcattggtcataggagcatgattttgtctttggcaatgtctcctgatggtcgctatatg
gcatctggtgatgaagatggtacaatcatgatgtgggacctctctagtggtagctgcctc
acgcctctggttggtcacacctcatgtgtctggacactcgctttcagctgtgaaggtacc
cttcttgcatctggatctgctgattctactgtgaagttatgggatgtgactaccagtgca
aaacttccaaggactgacgaaaagagcgggaatactaacagactcagatcattgaaaact
ctgccgactaaatctactcctgtttcgtcgttacggttttctcggaggaatctacttttt
gcagccggagctcttgcaagaagtggttaa

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