Prosopis cineraria: 129319421 Help Entry 129319421         CDS       T09047                                  Name (RefSeq) helicase sen1-like   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism pcin  Prosopis cineraria Brite KEGG Orthology (KO) [BR:pcin00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pcin03021]     129319421 Enzymes [BR:pcin01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      129319421     5.6.2.5  RNA 5'-3' helicase      129319421 Transcription machinery [BR:pcin03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      129319421 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_12 AAA_11 AAA_30 AAA_19 UvrD_C_2 TTD AAA_16 Motif Other DBs NCBI-GeneID:  129319421 NCBI-ProteinID:  XP_054820461 LinkDB All DBs Position Unknown AA seq 1333 aa AA seqDB search MGSRERPFFDLNEPPAVYDDEKDDPFCFQPQKTLPFTSPHAPDLNVASAEIQGVVKTQVF LHASSFSEIHPFVRSKTTYVPEEYAELVGADQKTKNYSLSKHVKDEDMRVMEPKALSSAN SQFVEREEGEWSDAEGSGDVNVCSNLLQQGRTSEEQAISGMAEGCVAVAVGKVSDGPPVE KSSYASINVETGPHEQKINGIQNSECIVKGEPSANTPDEPSTIPKQKEVKGIEAIHALRC ANNPGKRKMDQRKEEMLGKKRNRQIVVLNLEDAMQAGPIKTSTPRRQASSSSAVNRGVKE VHNIPAPIDRVGIVKDHKQVDISSSEGGSHADAYEPNCNGDIYEQLGWPKRQNSEHVHSV EVNLNHVSRQSSWKQSTDLRQQKNVQVSNKKLVLTGQSSSDMKPGNKKHFSIKKQTPVTT LSQDTSVERLIREVTSEKFWHRPEETELQCVPGQFESVEEYVRVFEPLLFEECRAQLYNT WEELIETVSRDTHIMVRVKTNEPRERGWYDVKVLPVHETKWTFKEGDVAILSFPRPGSVR AKRSSASLQGENEPEITGRVVGTIRRHIPIDTRDPPGAILHYYVGDSCDPSKVDDDHILR KLQGGSIWYLTVLGSLATTQREYVALHAFRRLNVQMQTAILRPSPEHFPKYEQQTPAVPD CFTQSFVEHLHRTFNEPQLAAIQWAATHTAAGTSSGTTKRQDPWPFTLVQGPPGTGKTHT VWGMLNVIHLVQYQHYYTSLLKKLAPESYKQANESNSENVPMGSIDEVLQNMDQNLFRTL PKFCPKPRMLVCAPSNAATDELLARVLDRGFIDGEMKVYRPDVARVGVDSQTRAAQAVSV ERRTEQLLIKSREEILGWLHQLKNREAQLSQQISCLQRELNVAAVAVCSQGSVGVDPDVL MARDQNRNTLLQNLAAAVESRDKVLVEMSRLLILESRFRPGSSFNLEEARANLEASFANE AEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVAILPPLSLGAARCVLVGDPQQLP ATVISKAAGTLMYSRSLFERFQQAGCPTILLSVQYRMHPQIREFPSRYFYQGRLADSESV AKSPDEAYYKDPLLRPYLFFDISHGRESHRGGSVSYQNVHEAQFCLRLYEHLQKTLKTLG VGKISVGIITPYKLQLKCLQREFEEVLNSEEGKDIYINTVDAFQGQERDVIIMSCVRASN HGVGFVADIRRMNVALTRARRALWVMGNANALVQSDDWAALIADAKSRNCLMGMDSLPKD FLVPKVPAYAPLPGKGSLNTRNLRSSGPRYRSMDLQMESRPETVPEDEEKTGTSSSFRNG YHRPLRYSRENSG NT seq 4002 nt NT seq  +upstreamnt  +downstreamnt atgggttctcgagaaaggccattttttgatctcaatgaaccacctgcagtgtatgatgat gagaaggatgaccccttttgttttcagcctcagaagacactcccatttacaagtccccat gctcctgacttgaatgtggcatcagcggaaatccaaggggtagtaaaaactcaggtcttt ttgcatgcatcttctttctctgaaattcatccatttgttcggtctaaaaccacctatgta cctgaggaatatgctgaattggtgggagcagatcagaaaacaaagaattattcgttatct aagcatgttaaagatgaggatatgagagtcatggagccaaaggcactaagttctgcaaat tctcaatttgtggagagagaagaaggggaatggtctgatgctgagggctctggtgatgtg aatgtctgtagtaatttgcttcaacaaggcagaacttctgaagagcaagccatatctgga atggcagaaggatgtgttgcagtagcagtgggcaaagtttctgatggtccacctgttgaa aagagtagttacgcttctatcaatgttgaaacaggtccccatgaacagaaaattaatggt atccagaattctgagtgcattgtaaaaggtgaaccttctgcaaacacaccagatgaacct agtacaattccaaagcaaaaagaagtgaagggtattgaagcaatccatgcacttaggtgt gcaaataatcctggaaagaggaagatggaccaacgcaaagaggaaatgttgggtaagaaa cgtaataggcaaattgtggttcttaatttggaagatgcaatgcaagcaggtcctattaaa acctcaacaccaagaaggcaggcttcctcatcatctgctgtaaatcgtggtgtaaaggaa gtccataatattcctgcgccaattgatcgtgttggaatagtcaaggatcacaaacaagtt gacatatcttctagtgaaggaggctcccatgctgatgcttatgaacctaactgtaatggt gatatttatgaacaattaggttggcctaagaggcaaaatagtgaacatgtacattccgta gaagtcaatttgaatcatgtttcaagacagagttcatggaaacagtcaactgatttgagg cagcagaaaaatgtacaagtttctaataagaagttggtattgactggtcagagctctagt gatatgaagcctggaaataaaaaacatttttctatcaagaagcaaactcctgtgaccact ttatctcaggacacgtcagtagaacgccttatacgggaggtgaccagtgaaaagttttgg catcgcccagaggagactgagctacagtgtgtaccgggccaatttgaatcagtggaagag tatgttagagtatttgagcctttgctttttgaggaatgccgtgctcagctgtacaatacg tgggaagaattaatagagacagtatcaagggatacacacataatggttcgtgtgaagacc aatgaacctagagaaagaggatggtatgatgtgaaagttcttccagtacatgaaaccaaa tggacattcaaggagggtgatgttgcaattctttcatttccaaggcctggttcagttaga gccaagcggagcagtgcatctttacagggtgaaaatgagccagagattactggacgtgta gtgggtacaattaggcgacacatacccatagatacacgggatcctcctggtgcaattctc cattattatgttggggactcttgtgacccaagcaaggttgatgatgatcatatcttaaga aagcttcaaggaggaagcatatggtacctcactgtgcttggttctctggctacaacacag agggagtatgttgctttacatgcatttcgtcgtttaaatgtgcagatgcaaactgcaatt ctacggccgagtcctgaacatttcccaaaatatgagcaacagacaccagctgttccggat tgcttcacacagagttttgttgagcatctgcatagaaccttcaatgaaccccagcttgct gcaatccaatgggcagcaactcacactgctgctggtacaagtagtgggaccactaagagg caggatccttggccctttacccttgttcaagggcctccaggaacaggaaagacacataca gtctggggaatgctaaatgtcatccacctggtgcagtatcaacactactacacctccttg cttaagaaactagcccctgaaagctacaagcaagctaacgagagcaattcagaaaatgtg cctatgggatcaattgatgaagttcttcaaaacatggaccagaatcttttccgtactcta ccaaaattttgcccaaaaccaagaatgctggtctgtgctccttccaatgctgccactgat gagcttcttgcgcgtgttctggatcgtggatttattgatggagaaatgaaagtttatagg cctgatgttgctcgagttggggttgattctcagacacgtgctgcacaggcagtttctgtt gagcgtagaactgagcagcttttgatcaaaagtcgtgaagaaattctagggtggttgcat caattaaagaatcgtgaggcacagttatctcagcagataagctgtcttcaaagagaactt aatgttgctgctgttgctgtttgttcacaggggtctgtaggagtagaccctgatgttctt atggcccgagaccagaatcgaaatacattgctacaaaaccttgcagctgccgttgaaagc agggataaagtattggtggagatgtctcgccttcttattttagaaagcaggttccgtcct ggtagtagtttcaatttagaagaggcccgtgctaatcttgaggcaagctttgcgaatgag gctgagatagtttttactactgtctctagcagtggtcgtaagttgttctcacgccttacc catggttttgatatggtggtcattgatgaggcagctcaggccagtgaggtggcaattctt cctcctctctctcttggtgcagctcgatgtgttcttgttggagatccccagcaacttcct gccacagttatcagcaaggcagctggcacattgatgtatagtaggagtctctttgaaagg ttccaacaggcagggtgcccaacaatattgttgtctgtgcaatatagaatgcatcctcag atccgagagttcccctcccgttacttttaccaaggacgccttgctgatagtgagagtgtg gctaagtcgcctgatgaggcatactacaaggaccctttacttagaccttatttatttttt gatattagtcatggacgagagtctcaccggggtggatcagtttcttatcaaaacgtacat gaagcacagttttgcctccgattgtatgaacatctccagaaaacattgaaaactttgggc gtaggaaaaatcagtgttggaataattactccttacaagctgcagttgaaatgcctccag cgtgagtttgaggaagtgctaaattcagaagaagggaaagacatatatattaacactgta gatgctttccaaggtcaggaacgtgatgtcattataatgtcttgtgtgcgggcatccaat catggggttggctttgttgcagatattcgtcggatgaatgttgcccttacccgtgcaagg agagctctttgggttatgggaaatgctaatgcattggtgcagtccgatgactgggctgca ttaattgctgatgcaaaatcccgaaattgcttaatgggcatggactctcttcccaaggac tttctggttcccaaagtaccagcttatgcaccgttgcctggcaagggttctttaaataca aggaacttgagatcaagtggaccaaggtatagatcaatggacttgcaaatggaatccagg ccagaaacagtacctgaagatgaagagaagacaggcacatcatcgagcttcagaaatggg tatcatcgccccttaaggtattcaagggagaactctggatga

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