Prosopis cineraria: 129319805
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Entry
129319805 CDS
T09047
Name
(RefSeq) pre-mRNA-processing factor 19 homolog 1-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
pcin
Prosopis cineraria
Pathway
pcin03040
Spliceosome
pcin04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129319805
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129319805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcin03041
]
129319805
04121 Ubiquitin system [BR:
pcin04121
]
129319805
03400 DNA repair and recombination proteins [BR:
pcin03400
]
129319805
Enzymes [BR:
pcin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129319805
Spliceosome [BR:
pcin03041
]
Complex B
Other components
Prp19 complex
129319805
Complex C
Prp19-CDC5 complex
129319805
Ubiquitin system [BR:
pcin04121
]
Ubiquitin ligases (E3)
U-box type E3
129319805
DNA repair and recombination proteins [BR:
pcin03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
129319805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_SPT8
NBCH_WD40
Beta-prop_DCAF12
U-box
WD40_like
Beta-prop_DCAF4
PAS_11
PROPPIN
zf-Nse
PEP5_VPS11_N
PUMA_CC
KNTC1_N
V_ATPase_I_N
Motif
Other DBs
NCBI-GeneID:
129319805
NCBI-ProteinID:
XP_054820853
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MNCCISGEVPEEPVVSKKSGLLYERRLIERHIADYGKCPITGEPLASDDIVPVKTGKIVR
PRPVQAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDEARSLLAQAERQFPVSAPNTMTANAVALSNGKRAAEDEELAPGGKKIHTGITTAIID
ELTECNASLSQQRKKRQIPATLAPVEALEGYTQISSHPFHKTSKPGIVSMDILYSKDLIA
TGGLDTNAVIFDRPSGQILSTLSGHSKKVTSVKFVAQGDQFLTGSADKTVRLWQSSDDGN
YVCRHVLKDHTAEVQAVTVHATNNYFVTASLDNTWCFYELSSGTCLNQVSDSSGSSGGYT
SAAFHPDGLILGTGTVEALVKIWDVKSQANVARFDGHVGAVTAISFSENGYFLATAAHDG
VKLWDLRKLKNFRTFTPYDPDTPTNSVEFDHSGSYLAVSGSDVRIYQVANVKSEWNCIKT
FPDLSGTGKATCVKFGPDAKYVAVGSMDRNLRIFGLPSEDGTTE
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaactgctgcatctccggcgaggtgcccgaagagccagtagtgtcgaagaagtctggg
ttactctatgagaggcgtttaattgagaggcacattgcggactatggaaagtgtccaatt
actggagaacctcttgcttcggatgacatagttccagtaaaaacaggcaagatagtgagg
ccccggcctgtacaggcagcaagtatcccaggcatgcttggaatgttccaaaatgaatgg
gatggactgatgctgtctaattttgcattggagcagcaattacacacagcaaggcaagag
ctaagtcatgctttatatcaacatgatgctgcttgccgagtgattgcaaggcttaaaaag
gaaagggatgaagcaaggtcattacttgcacaagcagaaaggcagttccctgtttccgca
ccaaatacaatgacagcaaatgctgttgctctcagcaatgggaaaagagctgctgaagat
gaggaactggcccctggtgggaagaaaatacatactggaatcaccactgccataattgat
gagctgactgagtgtaatgcatctctgtcacagcagaggaaaaagcggcagattcctgca
actttggctcctgttgaggctttagagggatatacccaaatatccagtcatccctttcac
aaaacgagcaaaccaggaattgtatctatggatatcctttattctaaggacttaattgct
actggagggctagatacgaatgctgtaatttttgaccggccatcagggcagatattatcc
acactcagtggtcactcaaaaaaggttacaagtgtgaaatttgtagctcagggtgatcag
tttttaaccggttcagcagacaagacagttcgtttgtggcaaagctcagatgatggtaac
tatgtctgcagacatgtattgaaggatcacacagctgaggtgcaagcagtcactgtccat
gctaccaacaattacttcgtcactgcttcccttgacaacacgtggtgcttttatgagctt
tcttcagggacatgtctgaatcaggtttcagactcttctggatcttctggaggctataca
tctgcagcttttcatcctgatggtctcattcttggaactggcactgtagaagctcttgtt
aagatctgggatgtaaaaagtcaggcaaatgttgctagatttgatggacatgtaggggct
gtgactgctatatccttttctgagaatggttacttcctcgcgactgcagctcatgatggt
gtcaaactatgggatctacgaaaactgaaaaacttccggacttttactccatatgatcca
gacactccaacaaattcggtggaattcgaccatagcggttcctaccttgcagtttcagga
tctgatgtaaggatttaccaagttgcaaatgtgaaatctgaatggaactgcattaaaact
ttccctgatttgtctggaacaggaaaagccacctgtgttaaattcggtccagatgcaaaa
tatgtagcagtcggatcgatggaccgtaatcttcgaatattcggcctgcccagcgaagat
ggcactactgagtga
DBGET
integrated database retrieval system
