Prosopis cineraria: 129320262
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Entry
129320262 CDS
T09047
Name
(RefSeq) protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcin03021
]
129320262
Transcription machinery [BR:
pcin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
129320262
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_19
TPR_8
TPR_14
TPR_16
TPR_17
TPR_6
TPR_11
TPR_9
TPR_7
ANAPC3
TPR_10
Fis1_TPR_C
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
129320262
NCBI-ProteinID:
XP_054821585
LinkDB
All DBs
Position
Unknown
AA seq
1088 aa
AA seq
DB search
MACVYIPVQNSEEEVRVALDQLPKDASDILDILKAEQAPLDLWLIIAREYFKQGKTDQFR
QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA
SRIDMHEPSTWVGKGQLLLAKGEVDQASAAFKIVLDGDHDNVPALLGQACVEFNRGRYSD
SLELYKRALQVFPNCPAAVRLGIGLCRYKLGQFEKARQAFERVLQLDPENVEALVALAIM
DLRTNEAAGIRKGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEVNKPHEFVFPYYGLGQVQLKLGDFRS
ALSNFEKVLEVYPDNCETLKSVGHIYVQLGQTDKGQEFLRKATKIDPRDAQAFLELGELL
ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNVGVLQFERGDFQLAQQTFEEALGDGIW
LSFINDEKKSFVDAAASILQFKDMQLFHDLESIGGHVEVPWDKVTVLFNMARLLEQLNKS
GTASMLYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNEKCPNALSMLGE
LELKNDDWVKAKETLRAASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKAK
ELYTRVLIQHAANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLA
HVYFAQGNFALAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLAP
SNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRIFSQLSAASNLHIHGFD
EKKIETHVGYCSHLLSAAKVHLEAAEREEQQMRQRQELARQVALAEEARRKAEEQRKYQL
ERRKQEDELKRVQQQEEHFKRVKEQWKSSTHSSKRRERSDDEDGGTNEKRRRKSGKRRKK
DKHSKSHYDTEEIGDMIDEQENEDEDADVNYRGPDAQMIDDDGAEENAQGLLAAAGLEDS
DVDDRMDAPSTISRRRQALSDSDDDDEPVQRHSSPIGENSANLQDSDGEVEDRGRTNGDF
ASDDEKQN
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcgtatacataccggtgcagaattctgaggaagaggtcagggttgctctggat
cagcttcccaaagatgcttctgatatcctcgacattctcaaggcggaacaagctcctctc
gatctttggcttatcatcgcgagggagtatttcaagcagggaaagactgatcaatttcgc
cagattttggaggaaggatcgagtcctgaaattgatgactattatgcggatgttagatat
gagaggatagctatcttaaatgccctaggggcttactatagttaccttggaaaaatagag
acaaaacaaagagaaaaagaggaacattttattttggcaacacaatattacaacaaagca
tcaagaattgacatgcacgagccctccacttgggttgggaaaggtcagctcttacttgca
aagggtgaagttgaccaggcatctgctgcatttaaaattgtgttagatggagatcatgat
aatgttcctgctcttctaggccaggcatgcgttgagttcaatcgtggacgctattctgat
tcacttgagttgtacaagcgggcattgcaagtgtttcctaattgccctgcagctgtgaga
cttggcataggtctttgtcggtacaaattaggtcaatttgaaaaagcacgacaggccttt
gagcgtgttttgcagctagatcctgaaaatgttgaagctcttgttgcacttgcaataatg
gatctgcgcactaatgaagctgctggaattaggaagggaatggtaaaaatgcagcgagca
tttgagatatatccctactgtgcaatggctctgaattatctagccaaccattttttcttc
actggtcaacattttttagttgagcaactcacagaaactgcactagctgttacaaatcat
ggtccaacgaagtcacattcttattacaatttagcacgatcttaccatagcaagggagac
tatgagaaagctggactttattacatggcatctgtcaaggaagtcaacaagcctcatgaa
tttgtgtttccttactatgggttgggacaagtacaattaaaattgggagattttagaagt
gcactctcaaattttgaaaaggttttggaggtgtacccagataactgtgagacattgaaa
tcagttgggcatatatatgttcagcttggtcagactgataagggccaggaatttttgagg
aaagctacaaaaatagatccacgtgatgctcaggcatttcttgaactgggagaattattg
attttgtccgacacaggagctgctctggatgcttttaaaactgcacgtacactttttaag
aagggaggtcaagaagtaccaattgaattactcaataatgttggtgtccttcagtttgaa
aggggagattttcagctcgctcaacaaacttttgaagaggctctaggtgatggaatatgg
ctctctttcattaatgatgaaaagaagtcatttgttgatgctgctgcatccattctgcaa
ttcaaggacatgcaattatttcatgacctagaaagtattggtggccacgtggaagtacca
tgggacaaagtcacggtactttttaacatggccagattacttgaacagctaaacaaatct
ggaactgcaagtatgctgtatcgcctgatcttgtttaagtatccagactatattgatgct
tatctgaggctagcagccattgcaaaagctcggaataacattctcttgagcattgaattg
gttaatgatgccttgaaggtcaatgaaaaatgtccaaatgccttgtctatgcttggtgag
ttggagttgaaaaatgacgattgggtgaaggcaaaagaaacccttcgggcagctagtgat
gcaactgatggaaaagactcctacgctactctttccttgggaaactggaactactttgcg
gctgttcgaaatgagaagagaaatccaaagctggaagctactcatttggagaaggccaag
gaactttataccagagttttgatacagcatgctgctaatttatatgctgccaatggtgct
ggggtagtcttagcagaaaaaggacactttgatgtttcaaaggatatcttcacacaggtt
caagaagctgcaagtgggagtgtttttgtgcagatgcctgatgtgtggataaacttggcc
catgtttattttgctcagggaaattttgccttggctgtgaaaatgtaccagaactgcttg
cggaagttttatcataacacagattcacaaatacttttatatctagcccgtacccattat
gaagctgaacagtggcaagactgtataaaaactctattgagagccatccatttggcaccc
tcgaattatacactaagatttgatgctggtgttgcaatgcaaaagttttcagcatcaacg
ctacaaaaggctaagaggactgccgatgaggtgcgagcaactgttgcagagctgcaaaat
gcggttcgtatatttagtcagctgtcggcagcttccaacctgcacattcatgggtttgat
gagaagaaaatagaaactcacgttggttattgcagccacttactttcagctgcaaaagtt
caccttgaagcagctgaacgtgaggagcagcagatgcgacagagacaagaacttgctcgt
caggttgcattggccgaggaagcccggcgaaaggctgaagaacaaaggaaataccagctg
gaaaggagaaagcaagaggatgaactaaaacgagtacagcaacaagaggaacattttaag
cgtgtaaaggagcaatggaagagcagcacacattcttcaaaacggagagagagatctgat
gatgaggatggtggtactaatgagaagcggagaagaaagagtggaaagaggagaaagaag
gataagcactcaaagtcacactatgacacagaggaaataggtgatatgatagatgaacag
gaaaatgaagacgaagacgctgacgtaaactacagagggcctgatgctcagatgattgat
gatgatggtgctgaagagaatgcccagggtcttcttgcagcagctgggcttgaagattct
gacgtagatgataggatggatgcaccttcaactatcagtcgacggaggcaagctttgtca
gattctgatgacgatgatgagccagtacagaggcattccagtcccattggagaaaattct
gctaatctgcaggacagtgatggagaagtcgaggataggggcaggaccaatggagatttt
gccagtgatgatgagaagcagaattga
DBGET
integrated database retrieval system