Prosopis cineraria: 129320265
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Entry
129320265 CDS
T09047
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pcin
Prosopis cineraria
Pathway
pcin03440
Homologous recombination
pcin03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129320265
03460 Fanconi anemia pathway
129320265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcin03032
]
129320265
03400 DNA repair and recombination proteins [BR:
pcin03400
]
129320265
Enzymes [BR:
pcin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
129320265
DNA replication proteins [BR:
pcin03032
]
Eukaryotic type
DNA Topoisomerases
129320265
DNA repair and recombination proteins [BR:
pcin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
129320265
FA (Fanconi anemia) pathway
129320265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
zf-CCHC
Zn_ribbon_GRF_2
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
129320265
NCBI-ProteinID:
XP_054821591
LinkDB
All DBs
Position
Unknown
AA seq
915 aa
AA seq
DB search
MGGRTINVLNVAEKPSVAKSVAAILSRSQGMRVREGRSRYNKIFEFNYAIRGQPCHMLFT
SVTGHLMELEFEERYRKWLSCDPADLYHAPVHKFVPEDKKDIKRTLEEEARRCQWLVLWL
DCDREGENIAFEVVEVCIAVNRHLNVKRARFSALIDREIHQAVQNLVEPNKWFADAVDAR
QEIDLRIGASFTRFQTMLMKDSFIIESATDDRNLVLSYGPCQFPTLGFIVERYWEIQAHE
PEEFWSINCSHKSDEGIANFSWMRGHLFDYTCAVIIYEMCVHEPTATVMQVRQQEKLKFP
PHPLNTIELEKRASRYFRMSSEQTMKVAEELYQAGFISYPRTETDSFSSRTDLHTIVQEQ
QGHPEWGSYAQRLLDPGTSLWRNPSNGGHDDKAHPPIHPTKFSVGESRWSQDHHKLYELV
VRHFLACVSQPAVGAETTVQIDIAGEMFSASGRVILAKNYLDVYRFESWGGAMIPTYTVG
QQFIPTTLTLDSRVTRPPPLLSEADLLSCMDREGIGTDATMHDHIKKLLDRFYAMKDANT
RFTPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKEVSEGNKTKADVLASSLQQMKACF
LDARLNKVKLLEAMAIFFERSNRSGSNEIHAAGEVIAVRPCGLCRESDMVLKKNRDGNFM
VGCLGFPQCRNAVWLPRSVSEATVTTNICNSCSPGPVYLIEFKFRQLEIPPNYNVNHLGC
IGGCDEILTQLTEICGTGPRVPARGRGSTAPPGNAHQTNMRHAVCMYCQETGHFSNDCPS
HTSGFRNARHRGMNQQSGEASISCNTCGIPCILRTANTSNNRGRKFYTCPSQECNFFVWE
DNLNNSTGGGSVTSSNSIGTSNASRNGGRGRGSWNGPHAATATFVSATGDPISGRRCFVC
GDPSHFANVCPNRGA
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggcgcaccatcaacgtactcaacgtggcggagaagccgtcggtggccaagtct
gttgccgctatactttcgaggagccagggcatgcgagtaagggagggtcgttcccgctat
aacaagatcttcgagttcaactacgcgattcggggccagccttgccacatgctcttcaca
tccgtcactggccaccttatggaactcgaattcgaagagcgttaccgcaagtggctctca
tgcgaccccgctgatctttaccatgctcctgtccataaatttgttcccgaggataaaaag
gacattaaaaggacgctggaggaggaagcaaggagatgccagtggcttgttctctggctt
gattgcgacagagagggtgaaaacattgcatttgaagtagtagaagtctgcattgcagta
aatcgccatctcaatgtaaagagggctcgtttttctgccctgattgacagggaaatacat
caagctgtgcagaatcttgttgagcctaacaagtggtttgcggatgccgtggatgctagg
caagaaatagatcttcgtattggtgcttctttcaccaggttccaaacaatgttaatgaaa
gattctttcataattgaatctgctacagatgatagaaatcttgtcttgagttatggtcct
tgtcagttccctacacttggatttattgtggagcgatactgggagatacaagcacatgag
ccagaagagttttggtccataaattgttctcataaatcagatgaaggcattgctaatttc
agttggatgcggggccatttgtttgattatacttgcgcagttataatatatgagatgtgt
gttcatgaaccaactgcaactgtcatgcaagttagacaacaggagaagctgaagtttcct
cctcatcctctgaataccattgagcttgagaagcgtgcttcgcgatacttccggatgagt
tctgaacaaacaatgaaggtggcagaagaactataccaagctggtttcatcagttatcct
cgcacagaaactgatagcttttcttcgaggactgatttgcatacaattgtacaagaacaa
caagggcatcctgagtggggatcatatgcacaacggttgttagatcctgggacatcactt
tggagaaaccctagtaatggggggcatgatgacaaggcccatccaccaattcaccccaca
aagttttctgttggagaatctagatggagccaggatcatcacaaattgtatgagttagtt
gttcgccattttttagcatgtgtctcccagcctgctgtaggagctgaaaccactgttcaa
attgatatagctggtgaaatgttttctgcatctgggagggtgatactagcgaagaactac
ctggatgtttatcgatttgaatcttggggtggggcaatgattccaacttatactgttggt
caacagtttattccaacaacattgacccttgattcacgagtgaccaggcccccaccgctt
ctgagtgaagctgatctactgagttgtatggacagggagggtattggtacagatgctaca
atgcacgatcatatcaagaagcttctagatcggttttatgcaatgaaggatgcaaatact
cgtttcacaccaactaatcttggtgaggcacttgttatgggctatgatgacatggggtat
aagctctggaaaccatatctcagagcagttatggaacgtgacatgaaagaagtcagtgaa
ggtaataaaaccaaagctgatgttttggcaagcagcttgcagcagatgaaagcatgcttc
ctagatgcgagattgaataaagtgaaacttctagaagccatggcgatattttttgagaga
tccaatagatctggcagcaatgagattcatgcagctggagaagttatagctgttcggcca
tgtgggctttgtcgagaatcagacatggtgctaaagaaaaatcgagatggaaattttatg
gttggatgtttgggattcccgcagtgtaggaatgctgtctggctcccaagatcagtatca
gaagcaactgtgaccaccaatatttgcaactcttgcagccctggccctgtttacctgatt
gaattcaagtttcgccaactggaaataccaccaaactacaatgtcaaccatttgggttgc
attggtggctgtgatgagattctcacgcagttgacagaaatctgtggcactggtcctcgt
gtaccagcaagagggagaggatcaactgcacctcccggcaatgctcaccagactaacatg
aggcatgcagtttgtatgtactgtcaagaaacaggacatttttccaatgattgtccttca
catacttcaggcttcagaaatgctcgacatcgtggaatgaaccaacagagtggggaagct
tctatttcatgcaatacgtgtggaataccatgtattctgagaactgcaaatacatcaaat
aaccggggaaggaagttctacacgtgtccatctcaggagtgcaacttttttgtatgggag
gataacctcaataatagcactggaggaggaagtgtgactagctcaaatagtattggaaca
tctaatgctagcagaaatgggggccgaggtagagggagctggaatggacctcatgctgct
acagcgacttttgtttcagcaactggtgatcctatatctggtagaaggtgctttgtgtgt
ggggatccgtctcactttgctaatgtctgccccaaccgtggagcgtga
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