Prosopis cineraria: 129320285
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Entry
129320285 CDS
T09047
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcin03019
]
129320285
03041 Spliceosome [BR:
pcin03041
]
129320285
03036 Chromosome and associated proteins [BR:
pcin03036
]
129320285
Enzymes [BR:
pcin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129320285
Messenger RNA biogenesis [BR:
pcin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129320285
mRNA cycle factors
Common to processing body (P body) and stress granule
129320285
Spliceosome [BR:
pcin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129320285
Chromosome and associated proteins [BR:
pcin03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
129320285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
129320285
NCBI-ProteinID:
XP_054821636
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MRTSWADSVDNSAIGSSNANAARPSRSTYVPPHLRNKQPSSEPPLTSQPSSLPANDRVNF
SGSTAGYRGGSFFDKTDYGRQDHGSSGRIGGGWNNRGGGWDRGREREVNPFENDEATDHT
FSEQENTGINFDAYDDIPVDTSGENVPPAVNTFAEIDLGEALNQNIRRCKYVKPTPVQRY
AIPISLAGRDLMACAQTGSGKTAAFCFPIISGILRMPHVQRPRVARTAFPLALILSPTRE
LSCQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVS
LQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPLQGLRQTMLFSATFPKEIQRLASDFL
DNYVFLAVGRVGSSTDLIAQRVEYVLESDKRSHLMDLLHAQRENGIYGKQGLTLVFVETK
KGADALEHWLCINGFPATSIHGDRSQQERELALRSFKSGNTPILVATDVAARGLDIPRVA
HVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNDNNLSLAKPLADLMQEANQEVPAWL
TRYAARASYGGGNRNRRSGGARFGGRDYRRDSQHNKGADYYGGASGYGVPATFGGGYGPP
GVTSAWD
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgagaacttcgtgggcagattctgtcgacaactcagcaattggttcttcaaatgccaat
gccgcgcgtccttctcggtcaacgtatgttccaccacatcttcgtaataagcagccatct
tcagaaccccctttgacatcacagccatcttcgttaccggctaatgatcgggtaaatttt
agtgggtcgactgctgggtatcgcggaggcagtttctttgataaaactgattatggaagg
caggaccatggttctagtggtcgaattggtgggggttggaacaatagaggcggagggtgg
gaccgtggaagggagcgtgaggttaacccatttgagaatgatgaagccacagatcatact
tttagtgagcaagaaaacacaggcattaactttgacgcttatgatgatatccctgtggac
actagcggggagaatgtgcctcctgctgtaaatacttttgcagaaatagacttgggtgag
gcattgaatcaaaatataaggaggtgcaaatacgtcaaaccaactccagttcagaggtac
gccataccaatttctcttgcggggcgagatctgatggcttgcgctcagacaggatcaggc
aagacagctgccttctgttttcctattataagtggaatcctgaggatgccacatgttcaa
agaccacgtgtagctcgaactgctttccctctagctcttatcctatctcctacccgggag
ctttcatgtcagatacatgatgaggctaaaaagttttcctatcaaactggtgtcaaggtg
gtagttgcttatggaggagcaccaataaaccaacagttgcgggagcttgagagaggagtt
gatattcttgtggcaactccaggacgtctggtagatttgttagagagggctagggtgtca
ctgcaaatgatcagatatttagctcttgatgaagcagatcggatgctggatatgggtttt
gagcctcaaataagaaaaatagttgaacaaatggacatgcctcttcaaggcttgagacaa
acaatgctgtttagtgccacttttcccaaagagatacagagacttgcatcggatttcctt
gacaattatgtgtttctggctgttggaagggttggttcaagtactgaccttattgctcaa
cgagtggaatatgtccttgaatctgacaaaagaagccatctcatggaccttcttcacgcc
cagagagaaaatggaatttatggcaagcaaggtcttacattagtttttgtggaaacaaag
aaaggagctgatgcattggaacactggttgtgcattaatgggtttcctgcaactagcatt
catggtgacagatcacagcaggaaagggaactagcattgaggtcgttcaagagcggaaac
acgccaattttagtggcaacggatgttgcagcacgtggtcttgatattccacgtgtagct
catgtggtaaattttgatcttcccaatgacattgatgattatgtgcatcggataggaaga
acagggagggctggtaaaatgggtttagcaacagctttcttcaatgacaataatctgtca
ttggctaagccattggctgatctgatgcaagaggcaaatcaagaagtacctgcgtggctc
acacgttatgcagctagagcttcctacggtggcggcaacagaaatcggcgttctgggggg
gcccgttttggtggccgtgattataggagggatagccaacataataaaggagccgactac
tatggcggagcaagtggatacggggttcctgccacttttggtggagggtatggtcctcca
ggtgttactagtgcctgggattag
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