KEGG   Prosopis cineraria: 129320422
Entry
129320422         CDS       T09047                                 
Name
(RefSeq) histone deacetylase 6
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
pcin  Prosopis cineraria
Pathway
pcin03082  ATP-dependent chromatin remodeling
pcin03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pcin00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    129320422
   03083 Polycomb repressive complex
    129320422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pcin03036]
    129320422
Enzymes [BR:pcin01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     129320422
Chromosome and associated proteins [BR:pcin03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     129320422
   HDAC complexes
    Sin3A-HDAC complex
     129320422
    BRAF-HDAC complex
     129320422
    REST complex
     129320422
    SHIP complex
     129320422
    MiDAC complex
     129320422
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     129320422
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    129320422
  Chromatin remodeling factors
   NuRD complex
    129320422
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 129320422
NCBI-ProteinID: XP_054821847
LinkDB
Position
Unknown
AA seq 461 aa
MGEGTEGGGVSLPSGPDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYYLH
RRMEINRPFPAAPEDIRRFHTDEYVEFLSSVTPETLGENTFSRQLKRFNVGEDCPVFDGL
FNFCQSSAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKV
HRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGAGPGKNYALNV
PLNDGMDDENFRGLFRPIIQKVMGVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLR
FLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVD
PCNMENLNSSKDMEKIRITLLEQLSRLPHAPSVPFQTTPCTIEVPEEVEEDMDRRPKRRI
WSGEDYDSDHDEDVKASPKYSNIRDVPDEMEEEKPERHPSS
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgggagaaggaacggagggtggtggtgtttctttgccttcgggtccagacgccaagaag
aggagggttacctatttctacgaacccaccatcggcgattactactacggccagggtcat
cccatgaaaccccatcggattcgcatggcccataatctcattgtccattactacctccat
cgccgcatggaaatcaaccgtcccttccccgccgcccccgaagacatccgccgttttcac
accgacgaatacgtcgagttcctctcctccgtcacgccggagaccctcggtgagaacaca
ttctctcgtcagctcaagcgcttcaatgttggcgaggactgccccgtctttgacggcttg
ttcaatttttgtcagtcctctgctggtggttccattggcgccgctgtcaagctgaaccgt
ggcgatgctgatattgccatcaactgggccggcggtctgcatcatgccaagaagtctgag
gcttctgggttttgttatgtcaatgatattgtcctcggcattcttgagctgctcaaggtt
cacaggcgtgtattgtatgttgacattgatgttcaccatggagatggcgttgaggaggct
ttctatacaactgacagagtgatgacagtttcttttcataagtttggggattttttccca
ggcactgggcacatcagggatgtaggggcaggcccagggaagaattatgctttaaatgtc
ccgttgaatgatggaatggatgatgagaatttccgtgggttgttccgccccatcattcag
aaagtcatgggggtgtatcaacctgatgcagttgttcttcaatgtggtgctgattcattg
tctggtgacaggctaggttgcttcaacttgtctgtcaagggtcatgcagattgccttcgt
ttccttagatctttcaatgttcctttgatggtcttgggtgggggaggatatacgattagg
aatgttgctcgttgctggtgttatgagacagcggtggctgtgggtgttgaacctgataat
aagttgccttacaatgaatattttgagtattttggcccagactacactcttcatgttgat
ccatgtaacatggagaaccttaactcatccaaggatatggaaaaaataaggatcacatta
ttagaacagctctccagacttcctcatgcacccagtgtgccttttcagacaacaccatgt
acaattgaagttccagaagaggtggaagaggacatggatcgaagacccaaacgtcgcata
tggagtggtgaagattatgattctgatcatgatgaagatgtgaaggctagtccaaaatac
tcaaatataagggatgttcctgatgagatggaagaagagaagccagaaaggcacccatcc
tcctga

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