Prosopis cineraria: 129320736
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Entry
129320736 CDS
T09047
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
pcin
Prosopis cineraria
Pathway
pcin03030
DNA replication
pcin03420
Nucleotide excision repair
pcin03430
Mismatch repair
pcin03440
Homologous recombination
pcin03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129320736
03420 Nucleotide excision repair
129320736
03430 Mismatch repair
129320736
03440 Homologous recombination
129320736
03460 Fanconi anemia pathway
129320736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcin03000
]
129320736
03032 DNA replication proteins [BR:
pcin03032
]
129320736
03400 DNA repair and recombination proteins [BR:
pcin03400
]
129320736
Transcription factors [BR:
pcin03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129320736
DNA replication proteins [BR:
pcin03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
129320736
DNA repair and recombination proteins [BR:
pcin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
129320736
MMR (mismatch excision repair)
129320736
DSBR (double strand breaks repair)
HR (homologous recombination)
129320736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Rhabdo_glycop_CD
Motif
Other DBs
NCBI-GeneID:
129320736
NCBI-ProteinID:
XP_054822288
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MVKSVTSDAISILLANPSPDSSSELPEIVVQVLDLKQSGNRFMFTANDGKMKLRAILPSN
QNSQVISGNIQSLGLIRIDDYTLNDIPNKSEKYLIVTKCESVSPALEMEIKTEVKSECPV
TLLNPKQEGEIKSEVKSEGAGIILRPKQETVSKSAAQIVHEQHTNIAPTARMAMTRRVRP
LVSLNPYQGNWTIKVRVTSKGNMRSYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF
YDRFALGKVYYISKGTLKVANKQFKTVQNDYEMTLNENSEVEEAANEESFVPETKFNFVL
IDQLGPFVNRSDLVDVIGIVQNVSSTMSIRRKSNNESISKRDITIADETKKTVVVSLWSE
LATNIGQELLDTADKSPVVAIKSLRVGDFQGISLSTISKSVVLINPDIPEANKLRCWYES
EGKDAPMASIGSGASATKNGIRSVYSDRISLAQITSNKSLGEEKPALFSVRAHISSIRPD
QTMWYRACTTCNKKATEAIGSGYWCEGCQKNVESTLRYILVARVSDASGEAYVSMFNNEA
EAIVGCSANELDSLKSQEGEDNPYQMKLKRATWTPHLFRVSVSQNEYMNEKRQRITVRAV
APVDYAAESRILLEEISKMSAS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggttaaatcagttacctcagatgcgatttcgatattgcttgcaaatccctctccagat
tcttcatcggagcttcctgagatcgtcgtccaagttctggatctcaagcaaagcggtaat
agattcatgttcactgctaacgatgggaagatgaagttaagggcaattcttccttctaat
cagaattcccaggtcatttcgggaaatattcagagcctgggtcttatccggatagatgat
tatactctcaatgatatcccaaacaagtcagagaaatatcttattgtcacaaaatgtgaa
tcggtctctcctgcacttgaaatggaaattaaaacagaagtcaagagcgagtgccccgtt
acgcttttgaatccaaagcaagagggtgaaatcaaaagcgaggtgaaaagcgaaggtgct
ggcattattttgagaccaaagcaagaaacagtgtccaaatctgccgctcagattgttcac
gaacaacatacaaacattgcccctactgcacggatggccatgacacgcagggtgcgccct
cttgtttccttaaatccttatcagggtaattggacgataaaggttcgtgtaacaagcaaa
ggcaacatgcgttcctacaagaatgcaagaggggaaggttgtgtcttcaacgtggaattg
acagatgaagatggaacccaaattcaagcaacaatgtttaatgaggctgccaggaaattt
tatgacagatttgcgcttgggaaggtttattacatttccaagggaactttaaaggttgct
aacaaacagttcaaaaccgtccaaaatgattatgagatgacattgaatgagaactctgag
gtggaagaggccgccaatgaagaaagttttgtaccagaaacaaaatttaactttgtcctg
attgatcagctgggtccttttgtcaacaggagtgaccttgttgatgtcataggaattgtt
caaaatgtgtcttccaccatgagcattcgaaggaagagtaacaacgagagtatttcaaag
cgtgatattaccattgctgatgaaacaaagaagacagtggtagtgtctttgtggagtgaa
cttgcaactaatatagggcaagaattactggatactgctgataaatctccagtagttgca
atcaagtccctcagggttggggattttcagggcatttccttgtcaactataagcaaaagt
gtagttctgataaatcctgatatacctgaagcaaacaagcttagatgctggtacgagtct
gaaggtaaagatgctccaatggcttccattggctcgggcgcatctgcaaccaaaaatgga
attagatcagtgtactctgaccgtatttcactagctcaaataacctcgaataaatccttg
ggggaggaaaagcctgcccttttcagtgtcagggcacatataagctctattaggcctgat
cagacaatgtggtatagggcttgtacaacatgcaacaagaaagccactgaagccattggg
tctggttattggtgtgaaggctgccagaaaaatgtagaaagcactttaaggtatattttg
gttgcacgagtttctgatgctagtggtgaagcttatgtctcaatgttcaataatgaagct
gaggcaattgttggttgttctgctaatgagctagatagcctaaaatcacaggagggagaa
gataatccatatcaaatgaaattgaaacgagcgacttggacccctcatctgttccgggtt
agtgtttctcagaacgagtatatgaacgagaagaggcagaggataaccgtccgagcagtt
gctcctgttgattatgctgcagagtcaaggattctcctggaagagatttcaaagatgagc
gcttcataa
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