Prosopis cineraria: 129321100
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Entry
129321100 CDS
T09047
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pcin
Prosopis cineraria
Pathway
pcin03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129321100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcin03021
]
129321100
03036 Chromosome and associated proteins [BR:
pcin03036
]
129321100
Transcription machinery [BR:
pcin03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129321100
Chromosome and associated proteins [BR:
pcin03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129321100
PBAF complex
129321100
GBAF(ncBAF) complex
129321100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
129321100
NCBI-ProteinID:
XP_054822811
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MNNPVKNVAASSLLSNSGIAPQPNTTGQPPHLLSQSKPQTQVASHFPGHFQLSEPQAQVF
AHAQYPQPHVRVQSQAPHAQFQGHLQPQTQPVVAQLHSTNTNTANMTPPSVSTPVTASAK
RATQKPPSRPSGSTIANASSPFKTMELTPAARRKKPKLPEKQIPEKVAALLPESALYTQL
LEYEAQIDAILARKKIDVRESLKNPPCVQKTLRIYVYNTFSDQAQIDSETKNAEEPSWSL
KITGRILEDGKDPVVAGISQKPGSMYPKFSSFFKKMTIYLDQSLYPDNHVILWESARSSI
QQDGFEVKRKGDKEFTAVIRIELNYLPEKFSVSAQLSKLLGIEVETRPRIIAALWHYVKS
RKLQSPNDPSFFMCDPPLQRVFGEEKIKFSMIAQKISQHLSQPQPIHLQHKIKLSGKSPA
GTGCYDVQVDVPLPLQKDMSSFLASIERHKEIDACDEVISTAIKKIHEHRKRRAFFLGFS
HSPAEFINALIGSQSKDLKLVAGDASHNAERERHAEFYNQSWVEDAVTRYLNRKTAESNA
PGST
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatcctgtaaagaacgttgcggcatcgtcccttttgagcaattccggaatcgcc
ccgcagcctaataccacgggccagccgccccatcttctctctcagtcaaagcctcaaaca
caagttgcatctcactttcctggtcactttcagctttctgagccccaagcccaggttttt
gctcatgcacagtatccacagcctcatgtccgtgtgcaatctcaggctccccatgctcaa
ttccaaggtcatttacaacctcaaacgcagcctgttgttgctcagttgcatagcactaac
actaacactgccaacatgactccaccttctgtttcaacgcctgttactgcaagtgccaag
cgggctactcaaaagccaccttccaggcctagtggttcgaccattgctaatgcatcttca
ccttttaagactatggaattgacccctgctgccaggcggaagaagccgaaattaccagag
aaacaaataccggaaaaggtggctgcacttttgccagagtccgccctttacactcagttg
cttgaatatgaagctcagatagacgctattttggcgaggaagaagattgatgtacgcgag
tctcttaaaaaccctccatgcgttcaaaaaactctacgtatttacgtgtacaatacattt
tcagatcaggcacaaatagattctgagacgaaaaatgcagaggaaccttcttggtcactt
aagataacaggaaggatattagaagatggtaaggatcctgtggtagctggaatctcccag
aaaccaggctctatgtaccccaaattttcatcctttttcaagaaaatgactatatactta
gatcagagcctttatcctgataatcatgtcatcttatgggagagcgctcgttcatctatc
caacaagatggttttgaggtaaagaggaaaggagacaaagaattcactgccgtgatcaga
atagaattgaattatttacctgagaagttctcggtttcagcacaactgtctaagctttta
gggattgaggttgagactcgcccaagaataattgctgctctttggcactatgtgaagtcc
aggaagctgcagagcccaaatgacccgtcattcttcatgtgtgatcctcctcttcaaagg
gtgtttggtgaagagaagataaagttctccatgattgcacagaagatatcacaacattta
tcacaaccacagcccatacatttgcagcacaaaatcaaactttctggaaaatctccagct
ggtactggatgttatgatgtgcaggttgatgtgcctcttccactacagaaggatatgtca
tccttcttggcaagtattgagaggcacaaagagatagatgcttgtgatgaagtgatctct
actgccataaagaagatccatgagcatcgtaagaggcgggctttctttcttggcttcagt
cactcccctgcagagtttattaatgctttgattggttctcagagtaaggatttaaagctt
gtcgctggagatgccagccataatgcagaaagagaacgacatgctgaattctacaatcaa
tcatgggttgaggatgctgtcactcgctacttgaaccgcaaaacggctgaaagtaatgct
cccgggagcacctaa
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