Prosopis cineraria: 129321502
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Entry
129321502 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DEAH13-like
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
pcin
Prosopis cineraria
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcin03009
]
129321502
Enzymes [BR:
pcin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129321502
Ribosome biogenesis [BR:
pcin03009
]
Eukaryotic type
90S particles
Helicases
129321502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
HTH_ABP1_N
ATPase
nSTAND3
Sigma54_activat
AAA_19
Motif
Other DBs
NCBI-GeneID:
129321502
NCBI-ProteinID:
XP_054823254
LinkDB
All DBs
Position
Unknown
AA seq
1333 aa
AA seq
DB search
MEVRAESGGNIKFNSQDGSLSLGDGGDDSNALLLPAKIGKKRKGMNQVHREINSNKKHKL
SQSQKRKLKKLEEDKEKELLLKRSIETLNKYKIPDYAYPLLQSAQNINRTDTVLERRRRA
IHLLKEGLRVDHSHDLSRILDVPHRFEPETEGIHVEQETMENDQTQLARFERELSCEPYA
PLLSSQEPACGDESYENIEPLTTSLGGVSVEENATSVHDDITQRYDRGKPIDESIRAESK
DGRCEISKTNLSEPSNLNDSSASTTPTVVHVYRPSEVQEKRKDLPIVMMEQEIMEAIRYH
SSVIICGETGCGKTTQVPQFLYEAGYGSSKSRVHKGVIGVTQPRRVAVLATAKRVAYELG
LHLGREVGFQVRYDKKIGDNCSVKFMTDGILLREVQNDILLRHYSIIILDEAHERSLNTD
ILIGMLSRVIRTRQEVYMEQQKTMLSGGSIAPNDMIFPLKLVLMSATLRVDDFTSKRLFL
TPPPVIEVPTRQFPVTIHFSKKTEIVDYIGQAYKKVLAIHKRLPPGGILVFVTGQREVEY
LCRKLRNASRELIMKASKVSVENDGAMVHGASSVGGLDMKEISEAYEIHGNSTTQQTDRF
SACDEDRQDLCEHESDFSYNSETDSDLEFDEDDNLKHSENNDFVNVLGEEGNHASLKAAF
ESLSGKAPSNSNSGGEQTLSVNKDGPLDQSIIYKEKRAREDSPSSXFVLPLYAMLPAAAQ
LRVFEESKEGARLVVVATNVAETSLTIPGIKYVVDTGREKVKNYNSCNGMEAYEVQWISK
ASAAQRTGRAGRTGPGHCYRLYSSAVFNNILPDFSLAEVSKVPIHGVVLLLKSMLIEKVV
KFPFPTPPSGTALVEAEESLHALEALDNNDQLTPLGKVMALYPLTPRHSRMLLTVIRLMK
SKYKCKRPSLLLAYAVAAAAALSLSNPFIMHFEGNDGNGDLEKYKKSSMVDSEKASDKEE
RSRRKKLKETAKVSRKKFRVISSDALTIAYALQCFEHSQKPKKFCDENVLHFKTMEEMSK
LRQQLLRLVFYQSTVGGLGQEYSWIHGTLEDTEHAWQVSCEKYPLLLDEERLICEAICAG
WVDRVAKRIIGSSRTLDGSTRVPAIRYQTCMCEESVFIHRWSSVSIAAPEFLVYNELLYT
NRPYMHGVTCVDPGWLVEHAKSSCVFSAPLMDPRPFYDTLTDQVKCWVNPTFGRFCWELP
KCQLPISDNDLRMQVFAYALLVGQVCPCLKFVRKYMAAPPESILKREAFCQKRVVNLLSK
LKSRLIDSSAMLRMVWQQNPRELHTEILDWFQQNFHKNFNGLWLQMIDEVLHEKKELSVY
KGERKLKNKSHHK
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggaagttcgtgcagaaagtggaggcaatatcaagttcaattctcaggatggatctcta
agcttgggagatggtggtgatgatagtaatgcattactattgccagctaagatagggaag
aaaaggaaagggatgaatcaggtacatagagaaatcaactcaaataagaaacataagttg
agccaatctcagaaaaggaagctgaagaagttagaggaggacaaggagaaagaacttcta
ctaaagagaagcattgagacattaaacaaatacaagattccagattatgcatatcctctt
ttgcagtctgcccagaatattaatcggactgacactgtgctagagagacggaggagagct
atacatttattgaaggaaggattaagggttgatcatagtcatgatctgtccaggattctg
gatgttccacacagatttgaacctgagacagaagggattcatgtggaacaggaaaccatg
gaaaatgaccaaacccaactggctagatttgaaagagaactctcatgtgagccttatgct
cctttactgtcctctcaagaaccagcttgtggtgatgaatcttatgaaaatattgaacct
ctgaccacctctcttggtggtgtctctgttgaggagaacgcaacatcagtacatgatgat
ataactcaacgttatgatagaggcaagcctattgatgagagtataagagctgaatccaag
gatgggagatgtgagatctctaaaaccaatctcagtgaaccgagcaaccttaatgattct
tctgcttcaactacccctactgttgtgcatgtatatagaccatctgaggttcaagagaaa
agaaaggatctcccaatagtcatgatggagcaagagattatggaagccataagatatcat
tcttctgttatcatttgtggtgaaactggatgcggtaaaacaactcaagttcctcaattt
ctttatgaagctggttatggttcgagcaagtctagagttcacaaaggtgttattggtgtt
actcaaccacgtagggttgctgttcttgcgacagcaaagcgtgtggcatatgagcttggt
cttcatcttggcagggaggttggctttcaagttagatatgacaagaaaattggagataat
tgttctgtcaagtttatgactgatggaatcttactacgtgaagttcagaatgatattctc
ttgaggcattattctatcataattcttgatgaggctcatgagaggagcttgaacacagat
attttgattgggatgttgtcacgtgttattaggactcggcaagaggtttacatggaacag
caaaagacgatgctttcaggaggaagcatagctcctaatgatatgattttcccattaaag
cttgtgctgatgagtgccactttgagagtagatgacttcacttctaaaaggttattcctg
acaccgccccctgttatcgaagttcccacaagacagtttcctgtgacgatacacttttca
aagaagacagagattgttgattatattgggcaagcatataaaaaggtcttggcaattcac
aagagattgccacctggtggcatacttgtctttgtcactggccaaagggaagtggaatac
ctttgcaggaagctacgcaatgcttcaagagagttgatcatgaaagcatctaaagtatct
gtagaaaatgatggtgctatggtacatggggcgagttctgttgggggactagatatgaag
gagataagtgaagcatatgagattcatgggaattcaaccacccaacaaacagataggttt
agtgcttgtgatgaagaccggcaagatttatgtgagcatgaatcagatttttcatataat
tcagaaactgatagtgatttggaatttgatgaagatgataatcttaaacattcagagaac
aatgattttgtcaatgtcctaggagaggaggggaaccatgcttccttaaaggcggccttt
gaatcgttgtcggggaaagcaccatcaaactccaattctggtggggagcaaactctctct
gtgaataaggatggacctttagatcaatcaataatttataaggagaagagggctagagag
gattccccaagttccncttttgttctaccactttatgctatgcttcctgcggctgctcaa
cttcgtgtatttgaagaaagcaaggagggagcgcgtcttgttgttgttgccacaaacgtt
gctgaaacctccttaacaatcccagggataaagtatgtggtggatactggaagggaaaaa
gtgaagaattacaattcctgcaatggcatggaagcatatgaagtacaatggataagtaag
gcatctgctgctcagcgaacaggaagagctggaagaactggacctggccactgttaccgt
ctttattcttctgcagtctttaataatatacttcctgacttctctcttgctgaagtctct
aaagtacccattcatggtgtggttcttctgttaaaatctatgcttattgagaaggttgta
aaattcccatttcctactcctcctagcggtacggcactggttgaagcagaggaatccttg
catgctcttgaagcacttgataacaatgatcaactcacgccactggggaaggtcatggca
ctttatcccttgactccacgtcactcaaggatgctccttacagttattagattgatgaag
agcaagtataaatgcaaacgaccaagtttacttctagcatatgctgttgcagctgctgct
gcattaagcctttcaaatccttttataatgcacttcgagggaaatgatggtaatggagac
ctagagaagtataagaaatctagcatggtggatagtgagaaagccagtgacaaggaagaa
agatcaaggagaaagaagctaaaagaaactgctaaagtttcccgtaaaaaatttcgtgtt
atttctagtgatgccctgacaatagcttatgctttgcagtgttttgagcattcacagaag
cctaaaaaattctgtgatgaaaatgtactgcacttcaaaaccatggaagagatgtcaaag
cttaggcaacagctacttagacttgtcttctatcagagtactgttggtggtttgggacag
gaatactcttggattcatggaactttggaggatacagaacatgcttggcaggtatcttgt
gaaaaatatcctcttttgctggatgaggaacggctcatctgtgaagcaatctgtgctggt
tgggttgacagggttgccaaacgtatcatagggtcctctaggaccttggatggcagcaca
agagttcctgctattcggtatcaaacatgcatgtgtgaagaaagtgtcttcattcatcgt
tggtcatcagtttctattgcagcccctgagtttttagtttataatgagttattgtataca
aacagaccatatatgcatggggtaacgtgtgtggatccaggttggcttgttgagcatgcc
aaatcttcatgtgtattctctgcacccttaatggatcccagacctttctatgataccctg
actgaccaagtaaagtgttgggtcaatccaacctttgggcgtttctgttgggagcttcca
aagtgccagttgccaattagtgataatgatcttaggatgcaagtttttgcctacgctttg
cttgttggtcaggtgtgtccatgtttaaaatttgtgcgaaaatatatggcggcccctcct
gaaagcattctgaagagagaagcattttgtcaaaagagggtcgtaaatctcttgagcaag
ttaaagagtaggttgattgatagttctgcaatgttaagaatggtgtggcagcagaatcca
agggaacttcatacagaaattttggattggtttcagcagaattttcacaagaacttcaat
ggtttatggttacaaatgattgatgaagtgcttcatgagaaaaaagaactctctgtctat
aagggtgaaagaaaactaaaaaataaaagccatcataaatga
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