Prosopis cineraria: 129321929
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Entry
129321929 CDS
T09047
Name
(RefSeq) pre-mRNA-processing protein 40C isoform X1
KO
K12824
transcription elongation regulator 1
Organism
pcin
Prosopis cineraria
Pathway
pcin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129321929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcin03041
]
129321929
Spliceosome [BR:
pcin03041
]
Complex A
U1 snRNP components
U1 related factors
129321929
Complex B
129321929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
129321929
NCBI-ProteinID:
XP_054823891
LinkDB
All DBs
Position
Unknown
AA seq
970 aa
AA seq
DB search
MASPAWFAQEARPPVTQIPVSGQTSGEISMASTSNSASTPPVAAGLFIPVQPVPHGVHQN
LNTSGNSQLVMNSAALPMVGQPPVPGLPSFAAPSFSYNISQSVQFPSNQHLQSSTNKSDS
VAQDVGKASSAFSIPHSASAHTSISAMSVLPDSNYRAAASWMPPTPSFPVHHIMPGAPGT
PGPPGLASASSTSSNPAAPLTNTDSCSSSAPRQNMPTVAIASNPVGPHMGSTYPSIPSMA
ASQGLWLQAPQMGGVPRPPLLPYAAAYPVPFPFPAHGVTVPAVPVPDSQPPGVTPVGATG
ATSSSSVHQPRGTADLQTEAVVGHSDDKQKLNATGTHSNNAVNDQLDAWTAHKTEGDIVY
YYNSLTGESTYDKPAGFKGEPDRVSVQPTPASMVNLPGTDWVLVTTGDGKKYYYNNRTKT
SCWQIPSEVTELKKKQNGDATKENLMSVPNTNVLSEKGSGMVTLNAPAINTGGRDAAALK
SSSSQGSSSALDLIKKKLQESGTPVSPPAIPTPLGPTLSESNSSKAPESTAKGLQCENHK
DKQKDPNGDANISDTSSDSEDEVKGPSKEERIIQFKEMLKERGVAPFSKWEKELPKIVFD
PRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDEASEDINHNTDYQ
TFRKKWGNDPRFEALDRKDREHLFNERVLPLKKAAEEKAQAIRAAAAASFKSMLLERGDI
TVNSRWSRVKESLRNDPRYKSVRHEDRDVLFNEYISELKAAEQAAERETKAKKEEQDKLK
ERERELRKRKERQEQEMERVRLKVRRKEAVTSFQALLVETIKDPMASWTESKPKLEKDPQ
GRATNPDLDPSDTEKLFREHVKMLQERCVQEFRALLTEVLNSEVASQENNDGKTAYNSWS
TAKHFLKSDPRYNKVPRKEREVLWRRYAEDMLRRKKSAHDPKEDKHDAKGRSSLESAKLP
LESRRSVERR
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaccagcttggtttgctcaggaagcacgtccgccagttactcaaattcctgta
tctggccaaacttctggagaaatatctatggcttcaacttcaaattctgcttctacacct
cctgttgcagctgggttgtttattccagtgcaaccagtccctcatggtgtgcatcagaac
ctgaacacatccgggaattctcagctggtgatgaattctgctgcacttccaatggttggt
caacctccagttcctggcctcccttcatttgctgcaccttcattctcatataatatctcc
caaagtgttcaatttcctagcaaccagcatttacaatctagcacaaacaagtcagattct
gttgcacaggatgttggcaaagcatcatcggcctttagcattccacattctgcttctgct
cacacttctatatccgcaatgtctgtattgccagattctaactaccgtgctgctgcttct
tggatgccacctactccatcttttcctgtacatcacataatgcctggagcaccaggaact
cctggtcctcctggattggcttcagcttcgtcaacatcctccaacccagctgctccacta
acaaacacagattcttgctcatcctcggcacctagacaaaatatgccaactgtggccatt
gcttcaaatcctgttggcccccatatgggctcaacctatccatccataccttccatggct
gcttctcaagggctttggttacaggccccacagatgggtggtgtacctaggccaccactt
cttccatatgctgccgcttatcctgttccctttccatttccagcacatggtgttactgtc
ccagctgttccagtacctgattctcaacctcctggtgttactcctgtgggagctactggt
gccacttcatcttcttcagtacatcagccaaggggaactgctgatttgcagacagaagca
gtggtgggacattctgatgacaagcaaaaattgaatgccactggtactcacagcaacaat
gccgttaatgatcaactagatgcctggactgcccataaaactgaaggagacattgtttac
tattataattccttgacaggagaatctacctatgataaacctgctggctttaagggggag
cccgatagagtttctgtgcagccaactccagcttcaatggtcaatttgcctggtactgat
tgggtgctggttaccacgggcgatgggaaaaaatattactacaacaaccgaactaagaca
agttgctggcaaatcccaagtgaagtgactgaattgaaaaagaagcagaatggtgatgct
actaaagaaaatttaatgtcagttccgaatactaatgtattgtctgaaaaaggatcagga
atggttactttgaatgctcctgctattaatactggtggtcgtgatgctgcagctttgaag
tcctctagttcacagggttcatcatcggcattggatttgatcaagaagaaattacaggaa
tcaggaactcctgttagtccccctgctattccaacaccattaggaccaacgctatctgaa
tccaatagttcaaaagcacctgaatctactgctaagggcctacaatgtgagaaccacaaa
gataaacaaaaggatcctaatggtgatgctaatatatctgacacgtcatcagattcagaa
gacgaagttaagggaccttcaaaggaggagcgtatcattcaattcaaggagatgcttaag
gagcgaggagtggcaccgttctcaaagtgggagaaagaattaccaaagatagtatttgat
ccacgttttaaggctatcccaagttattctgcgaggaggtccttgtttgagcattatgtt
aaaacccgtgctgaggaggaacggaaggaaaaacgtgctgctcagaaggctgcaatagag
ggatttaagcagttacttgatgaagcctctgaggatatcaatcacaacactgattatcaa
acatttcgaaagaaatggggaaatgatccacggtttgaggcattggatcgcaaggatcga
gagcacttgtttaatgaaagagtacttcccttgaagaaagcagctgaagaaaaggctcaa
gcaattcgtgcagctgctgctgccagttttaagtcgatgctcctggaacgaggagatata
actgttaattcccgttggtcaagggttaaagaaagtttaagaaatgatccaagatacaaa
tctgtgaggcatgaggatcgggatgttttattcaacgagtatatatctgaactaaaagct
gcagaacaagcagcagaaagagagaccaaagccaagaaggaggagcaggataagctgaag
gagagggagcgggagctgcgcaaaagaaaagaacgacaagaacaagaaatggagagggtg
cgactaaaagttcgcagaaaagaggcagttacttcatttcaggctttacttgtggagaca
atcaaagaccccatggcatcatggacggaatcaaagcctaaattagaaaaagatcctcag
ggccgtgcaactaatcctgatctagatccatctgacacagagaaactcttccgggaacat
gtgaagatgcttcaggagcgttgcgtgcaggagttcagagctctattaactgaagtcctg
aattctgaagtagcatctcaagaaaataacgatgggaaaacagcttataattcatggtca
actgctaaacattttctaaaatctgatccacgatataacaaggttccgagaaaagaaagg
gaagttttatggcgccggtatgcagaggatatgctgcggcggaaaaagtcagctcatgat
ccaaaggaagataagcatgatgcaaaaggtagaagctctctagagtctgcaaagcttcct
ctggaatcaaggagatcggttgagagaagataa
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