Prosopis cineraria: 129323210
Help
Entry
129323210 CDS
T09047
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
pcin
Prosopis cineraria
Pathway
pcin03410
Base excision repair
pcin03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129323210
03450 Non-homologous end-joining
129323210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcin03400
]
129323210
Enzymes [BR:
pcin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
129323210
DNA repair and recombination proteins [BR:
pcin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
129323210
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
129323210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
NTP_transf_2
HHH_5
BRCT
BRCT_2
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
129323210
NCBI-ProteinID:
XP_054825793
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MAPKAKTTKNSSSSLPQGMFSGMVVFLVEKRVQARRLQIWKQKLVQMGAVIEERLSKRVT
YILAMDSDSLLQQLDSERLSRFKGRVLLYQWLEDSLKSGEKLSEDMYILKAGPDDENVRD
KSLGPKPVHRSSYSDDKGLPNKKIKSSSEDTGTVNLETTGDRRENXSIFIASTASGHGDS
IRGLNYANTRSQSPNAENEASSLPYCPPNLNKNIIEIFGKLVNIYRALGDDRRSFSYHKA
ITVIEKLPFEIESVDQIKNLPSIGKSMKDHIQEIITTGKLSKLEHFETDEKVRTISLFGE
VWGIGPATALKLYEKGHRTLDDLRNDDSLTNAQKLGLKYFDDIRQRIPRNEVQEMENLLQ
KVGEDILPGVEIVCGGSYRRGKATCGDMDIIITHPDGKSHKGFLTKFVKRLKDMNFLRED
LVFSTHSEEGTDSGVDTYFGFCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRL
RLLAESKGFRLDDTGLFPAIQGSGGKRGGKGTASLKFHTEKEVFDFLGFPWLEPHERNL
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaaggctaaaacaacgaagaattcaagttcatctcttccacaaggcatgttc
tccggaatggtcgttttcttagttgaaaaacgagttcaagctcgtcgattgcagatttgg
aagcagaaattggtgcaaatgggggctgttatagaagagcgtttgtccaaaagggttact
tacattttggctatggactcagattcccttctccagcaattggatagtgagcgtttgtca
cgttttaaagggagagttctcctttatcaatggttggaagacagcttaaaatcgggggag
aagctatctgaggatatgtacatactgaaggcgggcccggatgatgaaaatgtacgtgat
aagtctttgggccctaaaccagttcatagaagtagttacagcgacgataaagggttaccc
aacaaaaagatcaaatcctcttctgaggatactggaacagtaaatcttgaaactactgga
gatagaagagaaaatngaagtatattcatcgccagtacagcaagcggtcatggtgattca
attcgaggtttaaattatgcaaatacaagatctcaaagtcctaatgctgaaaatgaggca
tcatccttgccttattgtccacctaatctaaacaagaacataatagagatatttgggaaa
ctcgtgaacatatacagagcattgggtgatgatcggaggtcctttagctatcacaaagct
attacagtgattgagaagttgccatttgaaattgaaagcgtggatcagatcaaaaacctg
ccatcaattggaaaatcaatgaaagatcatattcaggagataataaccaccggcaagtta
tctaagttggagcactttgaaactgatgagaaggttcgcacaatatccttatttggagaa
gtgtggggtataggtccagccacagcactaaaattgtatgagaaagggcaccgtacatta
gatgatctgaggaatgatgattcgctaacaaatgcacagaagttagggttgaaatacttt
gatgatattaggcaaaggattccacgcaatgaggtacaagagatggagaacttattgcag
aaagtcggcgaggatatattgcctggggttgagattgtttgtggaggatcatatagacgt
ggaaaagctacatgtggagatatggacattattattacacatcctgatggaaaaagtcac
aaaggatttttgacaaaatttgtaaagcgtttaaaggatatgaatttcctaagagaagat
ttggttttcagtactcacagtgaagagggtactgattctggtgttgacacatactttggt
ttttgtacctatcctggacgggagctgcggcatcgtatagatttaaaggtataccctaga
gacatatatgcttttggtcttatagcttggacaggaaatgatgtgttgaacaggaggttg
agactgctggcagaatctaaaggattccggcttgatgacactggtttgttcccggctatt
cagggttcaggtggtaaacggggtggaaaaggaacagcaagtttgaaatttcacacagaa
aaggaagtgtttgatttcctgggatttccttggcttgaaccacatgaaagaaatctttga
DBGET
integrated database retrieval system
