KEGG   Prosopis cineraria: 55764275
Entry
55764275          CDS       T09047                                 
Symbol
rpoA, HXT83_pgp031
Name
(RefSeq) RNA polymerase alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
pcin  Prosopis cineraria
Pathway
pcin03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pcin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    55764275 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcin03021]
    55764275 (rpoA)
   03400 DNA repair and recombination proteins [BR:pcin03400]
    55764275 (rpoA)
Enzymes [BR:pcin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     55764275 (rpoA)
Transcription machinery [BR:pcin03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     55764275 (rpoA)
DNA repair and recombination proteins [BR:pcin03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      55764275 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD HHH_XRCC3_RpoA RNA_pol_L_2
Other DBs
NCBI-GeneID: 55764275
NCBI-ProteinID: YP_009870994
UniProt: A0A7D4VIP1
LinkDB
Position
CP
AA seq 331 aa
MVREKVRASTRTLQWKCVESRADSKCLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRAKSEKIPHEYSTIAGIQESVHEILMNLKKIVLRSNLYGTRDASIWVKGPGYVTAQD
IILPPSVEIVDNTQHIANLTEPINLCIGLQIERNRGYRIKTLNTFQDGSYPIDAVFMPVR
NANFSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHADEKNLNLE
NNQDKVTLPLFTFHDGLAKLRKNQKEIGLKSIFIDQLELPPRIYNCLKRSNIHTLLELLN
NSQEDLMKMEHLRIEDVKLILDILEIEKHFA
NT seq 996 nt   +upstreamnt  +downstreamnt
atggttcgagagaaagtaagagcatccactcggacactgcagtggaagtgtgttgaatca
agagcagacagtaagtgtctttattatggacgctttattctgtctccacttatgaaaggt
caagccgacacaataggcattgcgatgcgaagagctttgctcggagaaatagagggaaca
tgtatcacacgtgcaaaatctgagaaaataccacatgaatattctaccatagcgggtatt
caagaatcagtacatgaaattttaatgaatttgaaaaaaattgtattgagaagtaatctc
tatggaactcgggacgcgtctatttgggtcaagggtccgggatatgtaactgctcaagac
ataattttaccaccttctgtggaaatcgttgataatacacaacatatagctaatctaaca
gaacctatcaatttgtgtattggattacaaatcgagaggaatcgcggatatcgtataaaa
acactaaatacctttcaagacggaagttatcctatagatgctgtattcatgcctgttcga
aatgcaaattttagtattcattcttatgtgaatgggaatgaaaaacaagagatacttttt
ctcgaaatatggacaaatggaagtttaactcctaaagaagcactttatgaagcctcccgg
aatttgattgatttatttattccttttttacatgcggacgaaaaaaacttaaatttagaa
aacaatcaagacaaagttactttacccctttttacttttcatgatggattggctaaacta
aggaaaaatcaaaaagaaataggattgaaatccatttttattgaccaattagaattgcct
cccaggatctataattgtctcaaaaggtccaatatacatacattattggagcttttgaat
aacagtcaagaagaccttatgaaaatggaacatcttcgcatagaagatgtaaaacttata
ttggacattttagaaatagaaaagcattttgcataa

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