Prosopis cineraria: 55764275
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Entry
55764275 CDS
T09047
Symbol
rpoA, HXT83_pgp031
Name
(RefSeq) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pcin
Prosopis cineraria
Pathway
pcin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
55764275 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcin03021
]
55764275 (rpoA)
03400 DNA repair and recombination proteins [BR:
pcin03400
]
55764275 (rpoA)
Enzymes [BR:
pcin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
55764275 (rpoA)
Transcription machinery [BR:
pcin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
55764275 (rpoA)
DNA repair and recombination proteins [BR:
pcin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
55764275 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
55764275
NCBI-ProteinID:
YP_009870994
UniProt:
A0A7D4VIP1
LinkDB
All DBs
Position
CP
AA seq
331 aa
AA seq
DB search
MVREKVRASTRTLQWKCVESRADSKCLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRAKSEKIPHEYSTIAGIQESVHEILMNLKKIVLRSNLYGTRDASIWVKGPGYVTAQD
IILPPSVEIVDNTQHIANLTEPINLCIGLQIERNRGYRIKTLNTFQDGSYPIDAVFMPVR
NANFSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHADEKNLNLE
NNQDKVTLPLFTFHDGLAKLRKNQKEIGLKSIFIDQLELPPRIYNCLKRSNIHTLLELLN
NSQEDLMKMEHLRIEDVKLILDILEIEKHFA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagaaagtaagagcatccactcggacactgcagtggaagtgtgttgaatca
agagcagacagtaagtgtctttattatggacgctttattctgtctccacttatgaaaggt
caagccgacacaataggcattgcgatgcgaagagctttgctcggagaaatagagggaaca
tgtatcacacgtgcaaaatctgagaaaataccacatgaatattctaccatagcgggtatt
caagaatcagtacatgaaattttaatgaatttgaaaaaaattgtattgagaagtaatctc
tatggaactcgggacgcgtctatttgggtcaagggtccgggatatgtaactgctcaagac
ataattttaccaccttctgtggaaatcgttgataatacacaacatatagctaatctaaca
gaacctatcaatttgtgtattggattacaaatcgagaggaatcgcggatatcgtataaaa
acactaaatacctttcaagacggaagttatcctatagatgctgtattcatgcctgttcga
aatgcaaattttagtattcattcttatgtgaatgggaatgaaaaacaagagatacttttt
ctcgaaatatggacaaatggaagtttaactcctaaagaagcactttatgaagcctcccgg
aatttgattgatttatttattccttttttacatgcggacgaaaaaaacttaaatttagaa
aacaatcaagacaaagttactttacccctttttacttttcatgatggattggctaaacta
aggaaaaatcaaaaagaaataggattgaaatccatttttattgaccaattagaattgcct
cccaggatctataattgtctcaaaaggtccaatatacatacattattggagcttttgaat
aacagtcaagaagaccttatgaaaatggaacatcttcgcatagaagatgtaaaacttata
ttggacattttagaaatagaaaagcattttgcataa
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