Paraburkholderia caledonica: CUJ87_01530
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Entry
CUJ87_01530 CDS
T05740
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pcj
Paraburkholderia caledonica
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcj03021
]
CUJ87_01530 (rpoH)
Transcription machinery [BR:
pcj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CUJ87_01530 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AXF13245
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All DBs
Position
PHRS4_A:complement(338946..339881)
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AA seq
311 aa
AA seq
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MSHALTLPSTLSPSSAKAAPAGALALSHSSLLPGQLGNIDAYIQAVNRIPMLTPAEERQF
ATEFREHDNLEAARRLVLSHLRLVVSIARNYLGYGLPHADLIQEGNIGLMKAVKRFDPEQ
NVRLVSYAMHWIKAEIHEYILRNWRMVKVATTKAQRKLFFNLRSHKQGLGAFTPGEIEGL
AKELNVKREEVAEMETRLSGGDIALEGQVEDGEESYAPIAYLADSHSEPTTVLASRQRDK
LQSDGIATALEALDARSRRIIEARWLKVEDDGSGGSTLHELADEFGVSAERIRQIEASAM
KKMRGALTEYA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtgagccatgcattgacccttccgagtactctgagcccgtcgtcggctaaggccgctccg
gcaggtgcgctggcgctctcgcattcctccctgctgcccggtcaactgggcaacatcgac
gcctacatccaggccgtaaatcggattccgatgctgacgccggcagaagaacgccagttc
gccacagaattccgcgagcacgacaacctcgaggctgcacgccgcctcgtgctgtcgcat
ctgcggctggtcgtctcgatcgcgcgcaactacctgggctatgggctgccgcacgccgac
ctgatccaggaaggcaacatcggcctgatgaaggccgtgaagcgcttcgatccggagcag
aacgtacgtctcgtgtcgtacgccatgcattggatcaaggccgagatccacgaatacatc
ttgcgcaactggcgcatggtgaaggtcgccacaaccaaggcgcagcgcaagctgttcttc
aacctgcgcagccataaacaaggcttgggcgctttcacgccgggcgagatagaaggtctc
gccaaagagttgaacgtcaagcgcgaagaagtagccgagatggaaacgcgcctctcgggc
ggcgacatcgcgctggaaggccaggttgaagacggcgaagagtcgtatgcgccgatcgca
tatctcgccgactcgcacagcgagccgacaacggtactggcctcgcgtcaacgcgacaag
ctgcaaagcgacggtatcgcgacggcactggaggcactcgacgcccgcagccgccgcatc
atcgaagctcgctggctgaaggtggaagacgacggttcgggcggctcgacgctgcacgaa
ctggccgacgagttcggcgtatcggctgagcgtattcgccagatcgaagctagcgcaatg
aagaagatgcgcggtgcgctgaccgaatacgcgtaa
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