Paraburkholderia caledonica: CUJ87_03080
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Entry
CUJ87_03080 CDS
T05740
Name
(GenBank) IS5/IS1182 family transposase
Organism
pcj
Paraburkholderia caledonica
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF772
DDE_Tnp_1
DDE_Tnp_1_6
Med9
MerR-DNA-bind
Motif
Other DBs
NCBI-ProteinID:
AXF13518
UniProt:
A0A2Z5M9U5
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Position
PHRS4_A:complement(706073..707518)
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AA seq
481 aa
AA seq
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MKRFVEGDDRKQVALLPECVDDYVGQDNPVRVIDAFVDELDLADLGFNGTTPALTGRPSY
HPGVMLKIYIYGYLNRIPSSRRLERECQRNVELMWLTGRLAPDFKTIADFRRDSGAAIRN
VCRRFVELCRGLKLLSSDMGAIDGSKFKASNTRDRNYTASKIDKRQKQIEESVQRYLDLI
ESADRTSPTGFDVKTVRLYEKIAVLRQQMRELKQIGRQLEEQPDKQLSLTDPDARSMATS
GRGSGIVGYNVQAAVDTKHHLIVEHEVTNVGNDHGQLSKMAISAKRTMGRSKLKVVADRG
YFSGPEIRACDLNGISAYVPKPLTSASRKKGLFTKADFIYVAKSDTYRCPAGERAIHRFT
TVEHDLNLRVYWPSACPRCHLKERCSPSDYRRIRRWEHENVLEVMQRRLDRKPDAMTIRR
STVEHVFGTLKHWMGPEHFLTRTLRRVSTEMSLQVLAYNLKRVLNILGVQGTLKAMKMVE
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgattcgttgaaggcgatgaccgcaagcaggtcgcactacttcccgaatgtgtc
gatgactacgtcgggcaggacaatccggtgagagtaatcgatgccttcgtcgacgaactt
gatctcgcagacctcggtttcaacggtactacaccggcgctcacgggccggccgtcttac
catcctggcgtgatgctgaagatctatatctacggctatctgaaccggataccgtcgagc
cggagacttgagcgcgaatgccaacgcaatgttgagttgatgtggctgacaggacggctc
gctccggacttcaagacgatcgcggacttccgccgtgacagcggcgcggcgatccgcaac
gtatgccggcgtttcgtcgaactgtgtcgcgggctcaagctgctatccagtgacatgggg
gctatcgacggtagcaagttcaaggcatcaaacacccgcgacaggaactacacggcaagc
aaaatcgacaagcgccagaagcagatcgaggaaagcgtgcagcgatatctcgatctgatt
gaaagcgcagaccgtaccagtcctaccgggttcgatgtaaagaccgtcaggctctatgag
aagatcgccgtgctgcgccagcagatgcgggagctcaagcagatcggcagacaactggaa
gagcagccggacaagcagttgtcgctgacggatccggacgcacgctcgatggcaacgagt
ggaagaggctccggcatagtgggctacaacgtccaggcagcagttgatacgaaacatcat
ctgatcgttgaacacgaagtaaccaatgtcgggaacgatcatggacaactcagcaaaatg
gcgatatctgcgaagcgcacgatgggcagatcgaagctgaaggttgttgcggaccgcggt
tacttcagcgggccggagataagggcatgcgatctgaacggcatcagcgcgtatgttccc
aagccgctcacgtcggcctcccggaaaaaaggcctgtttacgaaagccgactttatctac
gtagcgaaaagcgacacgtatcgatgccctgctggcgagcgggcgatccatcgattcacg
actgtcgagcacgacctgaatctgcgagtctactggcccagcgcgtgcccacgttgccac
ctcaaagaacgatgttcaccgtctgactatcgtcgaattcggcgatgggagcacgagaat
gtgcttgaagtgatgcagcgtcggctcgaccgcaaacctgacgccatgaccatccgcaga
agtaccgttgagcatgtcttcggcacgctcaagcactggatgggccccgaacacttcctg
accaggacgctcaggcgggtgagtacggagatgagccttcaggtgttggcttacaacctc
aagcgggtcttgaacatactcggcgttcagggaacattgaaggctatgaagatggtcgaa
agctaa
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