Paraburkholderia caledonica: CUJ87_04845
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Entry
CUJ87_04845 CDS
T05740
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pcj
Paraburkholderia caledonica
Pathway
pcj03030
DNA replication
pcj03430
Mismatch repair
pcj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CUJ87_04845
03430 Mismatch repair
CUJ87_04845
03440 Homologous recombination
CUJ87_04845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcj03032
]
CUJ87_04845
03400 DNA repair and recombination proteins [BR:
pcj03400
]
CUJ87_04845
Enzymes [BR:
pcj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CUJ87_04845
DNA replication proteins [BR:
pcj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CUJ87_04845
DNA repair and recombination proteins [BR:
pcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CUJ87_04845
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
AXF13816
LinkDB
All DBs
Position
PHRS4_A:1096012..1099602
Genome browser
AA seq
1196 aa
AA seq
DB search
MSPMSDPRFVHLRVHSEFSIADGIVRLDDVVKAAAQDGQGALALTDLGNAFGLVRFYKEA
RGKGVKPIAGCDVWITNPDDRDKPSRLLLLVKDRRGYLNLCELLSKASLTNQYRGRAEVE
AGWLESGLGEGLLALSGAQQGDVGLALAAGNQEAAKRNALHWAKVFPGGFYIELQRCGQP
GGEQYVQQAVALAASLKLPVVATHPMQFMTPDDFTAHEARVCISEGDILANPRRQKRFTP
EQYFRTQEEMAALFADIPSALANTVEIAKRCNLTLELGKPKLPLFPTPDGMSLDDYLVHL
SKEGLEKRLEQLYPDEAERAAQRETYYQRLEFECGTIIKMGFPGYFLIVADFINWAKNNG
VPVGPGRGSGAGSLVAYALGVTDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVI
QYVKEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGIAKLIPFKPGKHVTIAD
AMKEEPLLQERFDNEDEVHQLLELAQRVEGLTRNVGMHAGGVLIAPGRLTDFCPLYTQGD
ESGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKKDWSLGQVPLDDPA
SFSILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVALYRPGPMDLIPSFCARKHG
REVVEYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKAEEMAQ
HRELFRQGAAKNGLTGEKADEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEF
MAANMSLAMDDTDKVKILFEDCLANKMTVLPPDINLSAYRFEPVAEVDGKRSKTIRYGLG
AIKGSGQNAIEEILRAREDGPFIDIFDFCNRIDRRVVNRRTVEALIRAGAFDTLHPNRAQ
LIASVSLAMEAAEQASANALQAGLFDMGDAPSQGHELVDEPEWPEKKKLQEEKAALGFYL
SGHLFDAYKTEVRRFVRQKIGELKEGRDKLVAGIIASLRTQMTQRGKMLIALLDDGTGQC
EVTVFNETFEANKQLFKEDELLVVQGQARNDAFTGGIRFTVDTVMDLGRARCRYAEAVKV
QMNGNADALALRRVLEAHSAGKDEPQAVPAPAASSRGGNGGGRNGGGGFGGGYGGDNGRQ
RQPVQIPNGLAVQVVYRSENAEGEMRLGDAWRVKPTDELLADLRGQFAGSAIEIVY
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgtcagatccccgcttcgttcatctccgcgtccactccgaattctcgatt
gccgacggcatcgtgcgtcttgacgacgtcgtcaaggcggctgcccaggacggtcagggc
gcgctcgcccttaccgatctcggcaacgcgttcggtctcgtccgtttctataaggaagcg
cgcggcaaaggggtcaaacccattgccggttgcgacgtctggattaccaatccggacgac
cgcgacaagccttcgcgcctgctgctgctggttaaagaccgtcgcggctacctgaacctg
tgcgagttgctgagcaaggcttccctcacgaaccagtatcgtggtcgcgcggaagtcgag
gctggctggctcgaatcgggcctgggcgagggcttgctcgcattgtcgggggcgcagcag
ggtgacgtcggactcgcgcttgccgcaggcaatcaggaagcggcaaagcgcaacgcgctg
cattgggcaaaggtctttccgggcggcttctacatcgagttgcagcgttgcggtcagccg
ggcggcgagcagtatgtccagcaggcggtcgcgctcgcagcttcgttaaagctgccggta
gtcgccacgcaccccatgcagttcatgacacccgacgacttcaccgcgcacgaagcgcgc
gtgtgcatttcggaaggcgacattctcgccaatccgcggcgccagaagcgcttcacgccc
gagcagtatttccgcacgcaagaggagatggccgcgctcttcgcggatattccgtcggcg
cttgccaatacggtggaaatcgccaagcgctgtaatctcacgctagagctgggcaagccg
aaactgccgctctttccgacgcccgacggtatgtcgctcgacgactacctcgtgcatctg
tcgaaagaagggctggaaaagcgtctcgagcagttgtacccggacgaagcggagcgcgcc
gcgcagcgtgagacgtattatcagcggctcgagttcgagtgcggcacgatcatcaagatg
ggctttcccggctacttcctgatcgtcgcggacttcatcaactgggcgaagaacaatggc
gtgcccgtgggccccggccgcggctcgggcgcgggctcgctcgtcgcctatgcgctcggc
gtgaccgacctcgatccgctgcgctataacctgctgttcgagcgtttcctgaacccggaa
cgcgtgtcgatgcccgacttcgacatcgacttctgccagcacggccgcgaccgcgtgatc
cagtacgtgaaggagaaatacggcgcagacgccgtgtcgcaaatcgcgacgttcggcacg
atggccgcgaaggcggcggtgcgcgatatcggccgcgtgctcgatctcggctacatgttc
acagacggcatcgcaaagcttattccgttcaagccgggcaagcacgtcacgattgccgac
gcgatgaaggaagagccgcttctgcaggagcgcttcgacaacgaagacgaagtacatcag
ctgctcgaactcgcgcaacgtgtggaaggcctcacgcgcaacgtcggcatgcacgcgggc
ggcgtgctgatcgcgcccggcaggctgaccgatttctgcccgctctacacgcagggtgat
gaaagcggcgtcgtgagccagtacgacaaggacgacgtcgaagcggtcggcctcgtgaag
ttcgactttctgggtctcaccacactgaccattctggattgggccgagcgttatatccgc
cgtctcgatccgtcaaagaaagactggtcgctcgggcaagtgccgctcgacgaccctgcg
tcattctcgatcctgaagaaagcgaatacggttgccgtgttccagctggaaagccgcggc
atgcagggcatgctgaaagacgcgcagcctgaccgcttcgaggacatcatcgcgctcgtc
gcgttgtaccgtccgggcccaatggacttgatcccgagcttctgcgcgcgtaagcatggc
cgcgaagtggtcgagtatcctgacccgcgcgtcgaacctgttctgaaagagacctacggc
atcatggtctaccaggagcaggtgatgcagatggcgcagatcatcggcggctactcgctc
ggcggcgccgacttgctgcgtcgcgcgatgggtaagaagaaggccgaggaaatggcccag
catcgcgagttgttccgccagggcgccgcgaagaacgggctgaccggcgagaaggccgac
gaaatcttcgacttgatggagaagttcgcgggttacggcttcaacaagtcgcacgcggct
gcgtatgcgctcctcgcctattacaccgcgtggctgaaggcgcaccatccggcggaattc
atggcggcgaatatgtcgctcgccatggacgacacggacaaggtcaagatcctgttcgaa
gactgtctcgccaacaagatgaccgtgctgccgccggacatcaatctgtcggcgtatcgt
ttcgagccggtcgcggaagtcgacggcaagcgctcaaagaccatccgctatggcctcggc
gcgatcaagggcagcggccagaatgcgatcgaggaaatcctgcgcgcgcgcgaagacggt
ccgtttatcgacatcttcgatttttgcaaccggatcgaccgccgcgtcgtgaatcgccgc
acggttgaagcgctgattcgcgcaggcgcgttcgacaccttgcatccgaatcgcgcccag
ctgatcgcgtcggtttcgctcgccatggaagccgccgagcaggcgagcgcgaatgcgctg
caagcgggactgttcgacatgggcgacgcgccgtcgcagggccacgaactggtggacgaa
cccgagtggcccgaaaagaaaaagttgcaggaagagaaggccgcgctcggcttctacctg
tcggggcatctgttcgatgcgtacaagaccgaagtgcgccgcttcgtgcgccagaaaatc
ggcgagttgaaggaagggcgcgacaagctggtcgccggcatcatcgcgtcgcttcgcacg
cagatgacccagcgcggcaagatgctgattgcgctactcgatgacggcaccggtcaatgc
gaagtgacggtcttcaacgagaccttcgaagcgaacaagcaactgttcaaggaagacgag
ttgctggtcgtgcagggccaggcgcgcaacgacgcgttcacaggcggtatccgattcacg
gtcgacacggtcatggatctgggccgcgcgcgttgccgctatgccgaggccgtgaaagtg
cagatgaacggcaacgctgacgcattggcgttgcggcgcgtgctcgaggcacatagcgcg
ggtaaagatgagccgcaggcagtgccggcgccggcggcttcatcgcgcggcggcaatggc
ggtggacgaaacgggggcggcggatttggtggcggctacggcggcgacaatgggcggcaa
cgtcagcccgtccagatcccgaacggcctcgccgttcaggtggtataccgtagcgagaac
gcagagggcgaaatgcgtcttggcgacgcctggcgcgtgaagcccaccgacgaactgctt
gccgacctgcgcggccagttcgccggcagcgcgatcgagattgtgtattga
DBGET
integrated database retrieval system
