Paraburkholderia caledonica: CUJ87_06175
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Entry
CUJ87_06175 CDS
T05740
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pcj
Paraburkholderia caledonica
Pathway
pcj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CUJ87_06175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcj03400
]
CUJ87_06175
Enzymes [BR:
pcj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CUJ87_06175
DNA repair and recombination proteins [BR:
pcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CUJ87_06175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AXF14038
LinkDB
All DBs
Position
PHRS4_A:1405219..1406412
Genome browser
AA seq
397 aa
AA seq
DB search
MALHESVLEEFGLAPRWVRRGMAATQEAADESGAEQGADAPRPHRASDLTRLDAREPSSV
GLTPQTSPAPAMRTAEPSRQADDVVPTQTRIGNDAPGLDIQRSQPGAPRDDSQQAEPAAR
AEQSARRADQSANGAEPTQQRAPRAAESRNPASAEPHLPESSSFDAPPADDFAWFDDLPL
HPPGDAGAPMHALGDTPQPPAIHTLDWDALSERVSTCERCRLCEKRTRTVFGVGDRNADW
MLIGEAPGENEDRVGEPFVGQAGKLLDNMLRSLTLARDANVYIANVIKCRPPGNRNPEPD
EVARCEPYLQRQVGLVKPKLIVALGRFAAQSLLKTDASISSLRGRVHEYEGVPVIVTYHP
AYLLRSLPDKAKAWADLCLARDTWRAAGGAASNAAEQ
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcatgaatcagtactggaagagttcgggctcgcgccgcgctgggtacgtcgc
gggatggccgcgacccaggaagcggctgacgaatccggcgcggagcagggcgccgacgcg
ccgcgcccgcaccgtgcaagcgacctcacgcggctcgatgcgcgcgagccttcttcggtc
ggattgacgccgcagacgtcgcccgcgccggctatgcgcaccgcagagccgtcgcgacaa
gccgacgacgtcgtgccgacgcaaacgcggatcggcaacgatgcgccaggtctcgatata
cagcggtcccagccgggagcgccgcgcgatgattcgcagcaggcagagccggctgcgcgt
gctgaacagtccgcccgccgcgcagatcaatcggcaaatggcgcggagccgacgcagcag
cgcgcgccacgtgccgccgaaagccgcaatccggcaagcgccgagccgcacttgccagag
tcctcctcgttcgacgctccgcccgccgacgacttcgcctggttcgacgatctccctctt
catccgccgggcgacgctggcgcgccgatgcacgcgctcggcgacacgccccaacctccc
gcgatccacacgctcgattgggacgctttgagcgagcgggtctcaacctgcgagcgctgc
cggctgtgcgagaagcgcaccaggacggttttcggcgtgggcgatcggaacgccgactgg
atgctgatcggcgaagcgcccggcgagaacgaagaccgcgtgggcgagccattcgtcggc
caggccggcaagctgctggacaacatgctgcgctcactcacgctggcgcgcgacgcgaac
gtgtatatcgcgaacgtgatcaagtgccggccgcccggcaaccgcaatccggaacctgat
gaagtcgcgcgttgcgaaccctatctgcaacgccaggtggggcttgtaaagccgaagctg
atcgtagcgctcggtcgcttcgccgcgcaaagcctgctcaagaccgacgcgagcatttcg
tcgttgcgcggccgcgtccacgagtacgagggtgtgccggtgatcgtcacctatcacccg
gcctatctgcttcgtagcctgccggacaaggccaaagcgtgggccgatttgtgtctcgcg
cgcgatacgtggcgtgcggccggtggcgcagcgtcgaacgcggcagaacagtga
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