Paraburkholderia caledonica: CUJ87_06285
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Entry
CUJ87_06285 CDS
T05740
Name
(GenBank) RNA pseudouridine synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
pcj
Paraburkholderia caledonica
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcj03009
]
CUJ87_06285
Enzymes [BR:
pcj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
CUJ87_06285
Ribosome biogenesis [BR:
pcj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CUJ87_06285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
AXF14060
LinkDB
All DBs
Position
PHRS4_A:complement(1433011..1435116)
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AA seq
701 aa
AA seq
DB search
MRDKLTAKHPRPASSERAPVRSGSTSGRKPTRPAGPKSSMADPSGPRGEGAGTSSGGKRP
AGAGARGPRAPRAEGSFSREREAGGAGGARRATSDRPPRSESAGAPARRFEGSGERGPRR
EGGERAPRRFENRAAGDERAPRGAGGERSERAPRRFEDRTGGGQRAPGGAGGERAPRRFE
DRAGSTDRAARRFEDRAGNSERSPRGPSAERGERAPRRFEDRTGSTDRPPRRFEDRAGNS
ERSPRGPSAERGERAPRRFEERTGGTDRPPRRFEGNADRGASRSFDGERRPTSGPRTGAG
RPAEGGQRGERPTRGEREASDRPRFGERGPRSDSSPRRTESGRGERSFAKPVKSGYGDRA
DRPARAPGDPRVERGERAPARREFGDRAAPRTDRAERPARGFDKTPAAERRFTDDRPARA
SKSRGAAPAEHRPNAEAAPRTPRRDIEDAPGTLRLSKLMSELGLCSRREADEWIEKGWVL
VDGERIDTLGTKVRPDQRIEIDPAAEAVQASQVTVLIHKTVGYVSGQAEDGYQPAITLVT
PENRWEGDRSDIRFSVAHLRQLAPAGRLDIDSTGLLVLTQDGRIAKQLIGGHSDIDKEYL
VRVAYGEHTVDVESHFPPESLALLCHGLSLDDVPLKPAQVNWQNGEQLRFVLREGKKRQI
RRMCELVGLEVLGLKRVRMGRVMLGALPPGQWRYLAPDESF
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgcgagacaaattaacagccaagcacccgcggccggcttcgtccgaacgcgcccctgtc
cgtagcggcagcacgtcgggacgtaagccgacacggccggcaggaccgaaatcgtcgatg
gcggacccgagcggcccgcgaggcgaaggcgcgggcacgtcgtccggtggcaagcgtccg
gctggcgcaggcgcgcgcggaccgcgcgctccccgcgcggaaggctcattctcgcgcgaa
cgcgaagcgggcggagccggcggcgcacgacgtgcgacgtctgaccggccgccgcgcagc
gagagcgcgggcgcgcctgcgcggcgtttcgaaggaagcggcgagcgtggtccgcggcgt
gagggtggtgagcgcgcgccgcgccggtttgaaaatcgcgcggctggcgacgagcgggcg
cctcgtggcgcgggcggcgagcgcagcgaacgcgcaccgcgtcggtttgaagatcggacg
ggtggaggccagcgtgcgcccggtggcgcaggcggtgaacgcgcaccgcgccgttttgag
gatcgcgcgggcagcaccgaccgtgcggcccgccgcttcgaagaccgtgctggtaatagc
gagcggtcgccccgtggcccgagtgccgaacgtggtgaacgcgcaccgcgccgtttcgaa
gatcgcacgggcagcactgaccgcccgccccgccgcttcgaagaccgtgctggtaacagc
gagcggtcgccccgtggcccgagtgccgaacgcggcgaacgcgcaccgcgccgtttcgaa
gaacgcacgggcggcactgaccgcccgccccgccgcttcgaaggcaatgcagaccgcggc
gcctcgcgcagcttcgacggcgaacgccgtccgaccagcggcccgcggacgggagcaggc
cgtcccgcggaaggcggccagcgtggcgagcgtccgacgcgcggtgaacgcgaggcttcc
gaccgcccccgcttcggcgagcgcggaccgcgcagcgacagctcacctcgacgcacagaa
agcgggcgcggcgagcgaagctttgcaaagcccgtcaagagcggctacggcgaccgcgcc
gatcgtccggcccgcgcacctggcgacccacgagtcgaaagaggcgaacgcgcaccggct
cgccgcgaattcggcgaccgcgccgccccgcgcaccgaccgtgcggaacgcccggcacgc
ggcttcgacaaaacaccggcggccgaacgacgtttcaccgacgaccgccccgcgcgagcc
agcaagtcgcgcggtgccgctccggccgaacatcgcccgaacgcggaggctgccccgcgc
acgccgcgtcgcgatatcgaggacgcgcccggcaccctgcgcctctccaagctcatgtcc
gaactgggcctgtgctcgcgccgcgaagccgacgaatggatcgagaaaggctgggtgctc
gtcgacggcgagcggatcgacacgttagggacgaaggttcgcccggatcagcggatcgag
atcgatcccgctgccgaggccgtgcaagcaagccaggtcacggtgctgatccataagact
gtcggctacgtgtcgggccaggcagaagacggctaccagccggccatcacgctcgtcacg
ccggagaatcgctgggaaggcgaccgctcggacatccgcttctccgtcgcgcatctgcgg
cagctcgcgccggccgggcgtctggacatcgattcgacaggcttgctggtgttgacgcag
gacggccgcattgccaagcagctgatcggcggccattccgacatcgacaaggaatatctg
gtgcgcgtcgcctacggcgaacacacggtcgacgtcgaaagtcacttcccgccggaaagc
ctcgcgctcttgtgccacggtctctcgctcgacgacgtgccgctcaagccggcgcaagtc
aactggcaaaacggcgagcagttgcgcttcgtgctgcgcgaaggaaagaagcgccagatt
cgccggatgtgcgaactggtcggcctcgaggtgcttggcctgaaacgcgtgcggatgggc
cgcgtgatgcttggcgcgctaccgccggggcagtggcgctacctcgcaccggacgagtcg
ttctga
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