Paraburkholderia caledonica: CUJ87_07410
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Entry
CUJ87_07410 CDS
T05740
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pcj
Paraburkholderia caledonica
Pathway
pcj03030
DNA replication
pcj03430
Mismatch repair
pcj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CUJ87_07410
03430 Mismatch repair
CUJ87_07410
03440 Homologous recombination
CUJ87_07410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcj03032
]
CUJ87_07410
03400 DNA repair and recombination proteins [BR:
pcj03400
]
CUJ87_07410
Enzymes [BR:
pcj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CUJ87_07410
DNA replication proteins [BR:
pcj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CUJ87_07410
DNA repair and recombination proteins [BR:
pcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CUJ87_07410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_14
AAA_22
AAA_5
AAA_18
TsaE
DUF3646
Mg_chelatase
AAA_assoc_2
AAA_2
AAA_24
Glyco_tranf_2_5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AXF14253
LinkDB
All DBs
Position
PHRS4_A:1672400..1675153
Genome browser
AA seq
917 aa
AA seq
DB search
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK
ALNCETGVTSTPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLEHILGEENVPYEAQALRLLARAADGSMRDALSLTDQAIAYSANQVNEEAVRGM
LGALDQSYLIRLLDALAEGDGAAVLSVADEMALRSLSFSTALQDLASLLHRIAWAQFAPS
SVLDEWPEAGDLRRFAETLSAEQVQLFYQIATIGRSELGLAPDEYAGFTMTLLRMLAFEP
APTGGGGAAGSGRQAGQAGASGGKRAGTPAVAAAGLSAADTASPVRLAAGPRGAVSSAEP
AREPGRVSWAAGGAPASVGQKQDIAGSTQAVSASGDVAQHSAQESAPIANEANTPQTPAR
VDVPAPAAGTSAASESTTARALAPWDDEPTASAANRATDPSDVDAASASASMSAEPAPTP
AAADTPAALASESTSAETASLESTPPATLSAPAAAAFARASEAASAADSNETARPAPATL
PDAPPRRAGGASAALDVLRSAGLKVSSDRGRANAASTPKPAASANTSPAAPKPAAPRVVV
PVPTPGAPRGAAQPESASGARASASAAALAQSAARKESQLNGSAVPPWDDMPPDDYVPLS
ASDDGYYGPPDDNYTPVFDTGPDDVRVGAPASAPTPVVDKRPLPPAVPLDPLGFKGDWPA
LAVDLPLKGISYQLAFNSELMALEGNTLKLNVPVPQYAEASQVAKLKSALAEKLGQHVDV
QVEVGPARRTAAAHDAAMRAQRQQEAEREIGADPFVQSLIREFGASIVPGSIRPISSISS
ITSINPDAGPNGASSVH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagttctcgcacgcaaatggcggccgaaagatttcgcgtcgctcgtcgga
caggagcacgtcgtgcgcgcgctcacgcacgcgctcgacggcggccgtctgcatcacgcg
tatctttttaccggcacgcgtggcgtcggcaagacgacgctttcgcgcatcttcgccaaa
gcgctcaactgcgaaacgggcgtgacttccacgccgtgcggagtctgccgggcctgccgt
gaaatcgacgaaggacgctttgtcgattacgtcgagatggacgcggcaagtaatcgcggc
gtcgacgaaatggcggcgttgctggagcgcgcggtgtacgcgccggtcgatgcacgcttc
aaggtctacatgatcgacgaagtgcacatgctcacgaaccatgccttcaacgcaatgttg
aagacgctggaagagccgccgccgcacgtcaagttcattctcgccaccaccgatccgcag
aaaattccggtcacggtgctgtctcgctgtctgcaattcaatctgaagcagatgccggcc
ggccacatcgtctcgcacctcgaacacattctgggcgaagaaaatgtgccgtacgaggcc
caggcgttacgcctgctcgcgcgcgctgccgacggttcgatgcgcgacgcgctctcgctg
accgaccaggctatcgcgtattcggctaatcaggtgaatgaagaggctgtgcgaggcatg
ctcggcgcgctcgatcaaagctacctgatccggctgctcgatgcgctcgccgaaggtgac
ggcgcggctgtgctgtcggttgccgacgaaatggcgctgcgcagtctgtcgttctcgacc
gcgttgcaggatctcgcgagcctgttgcatcgcatcgcgtgggcgcagttcgcgccgtcg
tcggtactggacgaatggccggaggcgggcgacctgcgccgctttgccgagacgctcagc
gccgaacaggtgcagttgttctatcagattgcgacgatcggccgaagcgagctcggtctc
gcgcccgacgaatacgccggtttcacgatgactctgctgcgcatgcttgcgttcgagcct
gctccaacgggcggcggcggagcagccggatctggccggcaggctggccaggctggcgcg
agcggagggaagcgggcgggaacgcccgcggtggcggcggcgggtttgtcggcggcagat
acagcgtcgcccgtacggttggcggcgggcccgcgcggcgcggtttcttcggctgagccg
gctcgcgagccgggacgcgtttcctgggctgccggaggtgcgccagcaagcgtcggtcag
aagcaggacattgcgggaagcacacaagctgtgtcagcctccggcgacgtcgctcagcac
agcgctcaagagtcggcgccgatcgcgaacgaagcgaacactccccagacgcctgcgcgc
gtcgatgtgcccgcgccggccgcgggaacgtccgccgcttcggaaagtacgacagcgcgt
gcgttggctccgtgggacgatgagcctactgcgtctgccgccaaccgggcgacggacccg
agtgatgtcgacgcagcgtccgcgtccgcttcaatgtccgccgaacccgcgccgacgccc
gcagcagcggatacgcctgctgcgcttgcatcggaatccacgtcggcggaaacagcgtct
ttggaaagcacgccgcccgccacgctcagcgcaccggctgccgccgccttcgcgcgcgcg
agcgaagccgcgtccgcggcggattcgaatgagacggcccgacccgcgcccgcgacgttg
cccgacgcaccgccgcgccgtgcgggcggcgcgagcgccgcactcgacgttctgcgcagc
gctggcctgaaggtgtcgtccgaccgtggtcgcgcgaacgccgcgtcgaccccgaagcct
gcggcgtccgccaacacgagtccggccgcgccgaaaccggccgcgccgcgcgtggtggtt
cccgtgccaacgcccggcgcgccgcgtggcgcggcacagccggagtccgcatcgggcgcc
cgcgcgtcagcatctgcagcggcactggcacaatcggcggcgcgcaaggagtcgcagctg
aacggctcggcggttcctccatgggacgacatgccgcccgacgactatgtgccgctttcg
gcatcggacgacggctactacgggccgcccgacgacaactacacgcccgtgttcgacacc
ggccctgacgacgtccgcgtgggcgcgccagcatccgcgccgacgccggtcgtcgataag
cgtccgctgcctcccgccgtgccgctcgatccgctcgggttcaaaggcgactggcctgcg
ctcgccgtcgacctgccgctcaagggcatctcgtatcagctcgcgttcaacagcgaactg
atggcgctcgaaggcaataccctgaaactgaacgtgcccgtgccgcagtacgcggaggct
tcgcaggttgcgaaactgaaaagcgcgctcgccgaaaaactgggccagcatgttgatgtg
caggtcgaagtcggcccggcgcgtcgcacggcagccgcgcacgacgccgccatgcgggca
caacgccagcaggaagcggagcgcgaaatcggcgccgatccattcgtgcagtcgctgatc
cgggagttcggcgcgagcatcgtgccgggctccatccgcccgattagttcgattagctcg
attacttcgattaatccggacgccggcccgaacggcgcgtcctcggttcactga
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