Paraburkholderia caledonica: CUJ87_07735
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Entry
CUJ87_07735 CDS
T05740
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pcj
Paraburkholderia caledonica
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcj03032
]
CUJ87_07735
03036 Chromosome and associated proteins [BR:
pcj03036
]
CUJ87_07735
03400 DNA repair and recombination proteins [BR:
pcj03400
]
CUJ87_07735
DNA replication proteins [BR:
pcj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CUJ87_07735
Chromosome and associated proteins [BR:
pcj03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CUJ87_07735
DNA repair and recombination proteins [BR:
pcj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CUJ87_07735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
UBA_HYPK
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AXF14312
LinkDB
All DBs
Position
PHRS4_A:1749539..1749811
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIDHIAQQAEISKAAAGRALDAVIGGVKGTLKKGGSVTLVGFGTFAVGKRTARTG
RNPRTGDAIKIKAAKVPKFRPGKALKDALN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacggaattgatcgatcacattgcgcaacaagcggagatttcgaaggctgcg
gccggacgcgcgctcgacgcggtgatcggcggtgtgaaaggcacgttgaagaaaggcggt
tcggtgacgttggtgggtttcggcacgtttgccgtcggcaagcgcacggcccgcacgggg
cgcaatccacgaaccggcgatgcgatcaaaatcaaggctgcgaaggtgccgaaatttagg
cctggcaaagcgctaaaggatgcgctaaactaa
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