Paraburkholderia caledonica: CUJ87_08190
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Entry
CUJ87_08190 CDS
T05740
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
pcj
Paraburkholderia caledonica
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CUJ87_08190 (ltrA)
Enzymes [BR:
pcj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
CUJ87_08190 (ltrA)
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
GIIM
Motif
Other DBs
NCBI-ProteinID:
AXF14389
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All DBs
Position
PHRS4_A:complement(1862090..1863400)
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AA seq
436 aa
AA seq
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MGNLSTPISVQKLQTALHAKAKAEAGYRFYALYDKIYREDVLAHAYAQCRSNRGAPGVDR
QDFAAVEAYGVQRWLGELALALRQESYRPDPIRRVFIPKANGKLRPLGISTLLDRVCMTA
AMLVLEPIFEADLPSEQYAYRPGRNAQQAVIEVEERLHRGQTDVVDADLADYFGSIPHAE
LMLSLARRIVDRRVLHLIRMWLECSVEETDTRGRKKRTTEAKDSRRGIPQGSPISPLLAN
IYMRRFVLAWKKLGLQRSLGSRIVTYADDLVILCKKGKAEEALSRMREIMDKLKLTVNEE
KTRICKVPEGEFDFLGYTFGRLYSATTGKARMGMRPSKKSIRRMVEKLHAMTALKTVWQE
TTELVGRLNRTLRGWANYFKVGSDRRAYRALDSYTAARLRRWLRNKYKVRRRRGGTYPSQ
HLYGHFGLVRLTGPWL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
ttgggcaacctatcaactccgatcagtgttcagaagctgcagacggcgttacacgcgaaa
gcgaaggcagaagccgggtaccgcttctacgctctgtacgacaagatctaccgtgaggat
gtgctggcgcatgcgtacgcccagtgtcgctcgaacaggggcgcgccgggtgtcgatcgg
caagacttcgcggcggtcgaagcgtacggggtgcagaggtggctcggcgaactggcgctt
gcgctcaggcaggagagttaccgcccggaccctatcagaagagtgttcatcccgaaggcc
aatggcaagctgaggccactgggcatctcgaccttgcttgatcgggtgtgcatgacagca
gcgatgctggtgctcgaaccgatcttcgaagcggaccttccatcagagcagtacgcttac
cgcccggggcgaaacgcccagcaagcggtgatcgaggtggaggaacggctgcatcgaggg
caaacggacgttgttgatgccgaccttgcggactacttcggaagtattccacacgccgaa
ctgatgctgtcgcttgcgcgacgcatcgttgatcggcgcgtgctgcatctgatccggatg
tggctggaatgctccgtggaagaaaccgatacccgaggccggaagaaacgtacgacggag
gccaaagacagcagacgtggcattccgcaaggctcacccatctcaccactgctggcgaat
atttatatgcgccggtttgtgctggcatggaagaagctcggacttcagcgcagtcttggc
agtcgcattgtgacctacgcggacgatctggtgatcctgtgcaagaaagggaaggctgag
gaagccttgtcacgaatgcgcgagatcatggacaagctgaaactgacggtcaacgaggag
aagacgcgaatctgcaaggtgccggaaggcgaattcgacttcctgggttatacgtttggg
cggctgtactcagcgacgactggcaaggcccgtatgggcatgcgtccgtcgaagaagagt
atccggcgcatggtcgaaaagcttcatgcgatgaccgccctcaagacggtgtggcaagag
accacggagctggtgggcaggttgaaccgtacgctacgcggctgggcgaactacttcaag
gtaggctcggacagacgcgcgtatcgcgcgctcgatagctacactgctgcgcggttgcgc
cggtggttacgcaacaagtacaaggttcgacgtcgcaggggcgggacttatccatcccag
cacctttacgggcacttcggtctcgtgcgtctgactggtccatggttgtga
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