Paraburkholderia caledonica: CUJ87_09690
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Entry
CUJ87_09690 CDS
T05740
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pcj
Paraburkholderia caledonica
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcj03016
]
CUJ87_09690
Enzymes [BR:
pcj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CUJ87_09690
Transfer RNA biogenesis [BR:
pcj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CUJ87_09690
Prokaryotic type
CUJ87_09690
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AXF14646
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All DBs
Position
PHRS4_A:complement(2197851..2198786)
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AA seq
311 aa
AA seq
DB search
MTAPQRPRVPRRALDGVLLLDKPLGLSSNDALIRAKRLYLAKKAGHTGTLDPLATGLLPL
CFGEATKFSQDLLEADKTYEATMRLGVRTTTGDAEGEPVDTRAVTCDEAAVLAALPAFVG
EIVQVPPMYSALKRDGKPLYEYARAGQTVEREGRQVTIHSLELLACALPDVSFRVTCSKG
TYVRTLAEDIGEALGCGAHLVALRRTGVGALTLEHAVTLDALSDATESERDAWLQPVDAL
LSTFPSVHLDEDATRRFLHGQRLKLSELSLSGEAANAQRVRVYAAQGRLLGVAKQGEGVL
APERLVVTTAN
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacctcaacgcccccgcgtgccgcgccgcgcgctcgacggcgtgctgctgctc
gacaagccgctcggcctgtcgagcaacgacgcactgattcgcgcgaagcgcctctatctg
gctaaaaaggccggccataccggcacgctggatccactcgcgaccggcttgttgccgctg
tgtttcggcgaagccaccaagttttcgcaagatctgctcgaggccgacaagacctacgag
gccaccatgcgcctcggcgttcgcactaccaccggggacgccgaaggggagccggtcgac
acgcgcgcggtgacgtgcgacgaggcggcggtcctcgcggccctgccggcatttgtcggc
gagatcgttcaggtaccgccgatgtactcggcgctcaagcgcgacggcaagccgctctac
gaatacgcgcgagccgggcagacagtcgagcgggaagggcgccaggtgacgatccactcg
ctcgagttgctcgcttgcgcgctgcccgatgtgtcgttccgcgtcacctgtagtaaaggc
acgtatgtgcgaacgctggcagaggacatcggcgaggcgttgggttgtggggctcatctg
gttgccctgcggcgcaccggtgtcggcgcgctgacgctcgagcatgcggtgacgctcgac
gcgctatcggatgcaacggaaagcgagcgcgacgcgtggttgcaaccggtcgacgccttg
ctgtcgacgttcccgtccgtgcatctggacgaagacgcgacgcggcgctttttgcacggt
caacggctgaagctgtccgagctgagtctgagcggtgaagcggcgaatgcgcagcgcgtg
agggtctacgccgcgcaagggcgtctgctgggcgtcgcgaaacagggtgagggcgtgctc
gcgcctgaacgcctggtcgtgacgacggcgaactag
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