Paraburkholderia caledonica: CUJ87_09790
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Entry
CUJ87_09790 CDS
T05740
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pcj
Paraburkholderia caledonica
Pathway
pcj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CUJ87_09790 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcj03400
]
CUJ87_09790 (recC)
Enzymes [BR:
pcj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CUJ87_09790 (recC)
DNA repair and recombination proteins [BR:
pcj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CUJ87_09790 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AXF14665
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All DBs
Position
PHRS4_A:complement(2223777..2227154)
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AA seq
1125 aa
AA seq
DB search
MLQLFYSNRYETLVGALLDDLAQAPSDAWTAQPVIVPSAAVRRRLELDIAARQGVCANVS
FGYLAQWLWAQIGSVTEVPRHSPFAPDRLVWRCYRLLGDAHDSLPWNASPRLRTYLDAAD
PSMRYELARRVATVLDHYLTYRPEWLLQWQKGGSIFAGGAADDTGPRLVGASDAAREDER
WQAALWRAVLTELAGNEQTPDAALPPAYRFLDEIGTLDLDAIAKANWPEAVSVFALPTMP
PLHVALLRALSRWVDVRLYVMNPCREFWFDVVSEGRVQALDAAGQLDYQEVGHPLLAEWG
RQTQAQLHMLHELTESAASGEAGEFSENPEPSWLAAVQNGILDLRPETEADELPYERGIE
VHVCHSLSRQLEVLHDRLLGWFDEFDDLQPSDVLVAVSDLAAAGPLIDAVFGTTPSGDTR
RIPYRITGLPPSQANPVARLVLDWLALPERSVGAPDLIEWLRVDAVAVRYGIDASSLEAA
QEWLAAAGARRGLSPAEPSGEHVPVARHTFADALTRLYLGYAMPEGGEPVDAWLPVKGAD
GSDAELLGRLSRFVDDIDSFAVRCATEQTPAEWTQLLLETLAQCFDGGVEFAESLAAVRD
AIDKMSDAMQAGAHEVAMPAAVVRVALTEALDDPARGGVPWGSVTFSSLTSLRGLPYRVV
CLLGMDDGVLPSLARADEFDLMAAFGKAGDRQRRDDERNLFLDLLLAARSRLFIAYTGRS
IRDNAPLPPAALVDELLDHLAQVSAGEGASPAQLEEARHAFIVDHPLQAFASEYFTAQPD
LFTYDADRAELATLLAAPQQRGAAPFFDQPLPAEDAAPVGFDEFVRFWRHPARALLRDRL
GIVLSDAQGELLDTEPFELDYTGRDALAGRLLPVLLDADIEDDDLMFDRVRRVAEASPEL
PGGATGAVWRARELGALRQLADSVRREVASGVERLPFVLDIAPRWPDNADIAGELFGVHD
AELREAAPTPLQLHGTLNLLTETGQVIFRYAKPTARDYLSAWLAHLAYCAALPDGPRRTV
WHGSGESFELAPVAAPLEELAPLAALFRSGRRLPLRFFPKSAWAKVSESDSAAQGVWIND
RVRGESDDPALRIALRGTPLTLDEPFGSLASIVFKPLLQHLRSVS
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgctccagctcttctactcgaaccgctacgaaacgcttgtcggcgcgctgctcgatgac
ctcgcgcaagcgccttccgacgcctggaccgcgcagccggtgatcgtcccgagcgccgct
gtgcggcgcaggctcgagctcgatatcgccgcgcgccagggcgtctgcgcgaacgtcagc
ttcggctatctcgcgcaatggctgtgggcgcaaatcggtagcgtgaccgaggtgccgcgc
cattcgccgttcgcgccggacaggctcgtctggcgctgttatcgtctgctgggcgatgcg
cacgattctctgccgtggaacgcgtcgccgcgtcttcgcacctatctcgatgccgcagat
ccgtcgatgcgttacgaactggcgcggcgtgtggcaaccgtgctcgatcactatctgacc
tatcgtccggaatggctgctgcaatggcagaagggcgggtccatcttcgcgggcggcgcg
gcggacgacacaggcccgcgcctcgtcggcgcgagcgacgcggcgcgcgaggacgagcgc
tggcaagccgcattgtggcgcgctgtgctcactgaacttgccggcaacgagcaaacgccg
gacgccgcattgccgcccgcataccgttttctcgatgagatcggtacgctcgacctggac
gccattgcgaaagcaaattggccggaagcggtgagcgttttcgcgttacccaccatgccg
ccgctgcacgtcgcattgctgcgtgcgctgtcgcgttgggtcgacgtgcgtctctacgtc
atgaacccgtgccgcgaattctggttcgacgtggtgagcgaaggccgggttcaggcgctc
gacgcggcaggacagctcgactatcaggaagtcggtcatccgctgcttgcggagtggggt
cgtcagactcaggcgcagttgcatatgctgcacgagctcaccgaaagcgcggcttccggc
gaggccggcgagttctctgaaaatcccgaaccgagctggctcgccgccgtgcaaaacggc
attctcgatctgcgcccggagaccgaagccgacgagttgccgtacgagcgcggcattgaa
gttcacgtgtgtcacagcctgtcgcgacagctcgaagtgctgcacgaccggctgctcggc
tggttcgacgaattcgacgatctgcaaccgtccgacgtgctcgtcgccgtgtccgatctg
gccgctgccggtccgttgatcgacgcggtgttcggcactacacccagtggcgatacgcgc
cgcattccatatcggatcaccggcttaccgccttcgcaggccaatcccgtcgcgcgcctc
gtgctcgactggctggctttgcccgagcgcagcgtcggcgcaccggacctgatcgaatgg
ctgcgcgtcgacgcggtcgccgtgcgttacggcatcgacgcgagctcgctcgaagccgcg
caggaatggctcgcggcggccggcgcgcggcgcggactatcgcctgcggagccaagcggc
gaacacgtgccggtcgcgcgacacaccttcgcggatgcgctgacccgtctgtatctcggc
tatgcgatgccggagggcggggagccggtcgacgcgtggctgcctgtcaagggcgccgac
ggttcggacgcggagttgctcggccgcctgtcgcgtttcgtcgacgacatagacagtttc
gcggtgcgctgcgcgacggaacagactccggccgaatggacgcaattgctgctcgaaacg
cttgcgcagtgtttcgacggcggcgtcgaattcgcggagtcgctcgccgcggtgcgcgac
gcgatcgacaagatgagcgacgccatgcaggcgggcgcgcatgaggtcgcgatgcccgcg
gcagtcgtgcgcgtcgcgctcactgaagcactcgacgaccccgcgcgcggcggcgtgcct
tggggcagcgtgacgttttcgtcgctgacgagcttgcgcggtttgccgtaccgcgtggtc
tgtctgctcgggatggacgacggcgtgttgccgagcctcgcccgtgcggacgaattcgat
ctgatggccgcgttcggcaaagccggcgaccggcagcgccgcgacgacgagcgcaatctc
tttctcgatctgctgctcgccgcgcgcagccggctctttatcgcttataccggccgcagc
atccgcgacaatgcgccgttgccgccggccgcgctcgtcgacgaactgctcgaccacctc
gcgcaggtgtcggcgggcgagggtgcgagtcccgcgcagctagaagaagcgcgccacgcg
ttcatcgtcgatcacccgttgcaggcatttgcgtcggagtacttcaccgcgcagcctgat
ctgtttacctacgacgctgatcgcgcggaacttgccactttgctcgcggcgccgcagcag
cgaggcgccgcgccatttttcgatcaaccgttgcccgctgaagatgctgcgcccgtcgga
ttcgacgagttcgtgcgcttctggcgtcatccggcgcgcgcgctgctgcgtgaccgcctc
ggcattgtgttgtcggacgcccagggcgagctgctcgacacggagccgttcgaactcgat
tacaccggacgcgatgcattggccggccgcctgttgcccgtgctgctcgacgccgacata
gaagacgacgatctcatgttcgaccgcgttcggcgcgtggccgaggcgagtcccgagttg
cccggcggcgcgaccggcgccgtgtggcgcgcgcgcgaactgggcgcgttgcgccagctc
gccgacagcgtgcgccgcgaggtggcatcgggggtcgaacgcttgccgttcgtgctcgac
atcgcgccgcgttggccggataacgcggacattgcgggcgagcttttcggcgttcatgac
gcggagcttcgcgaggccgcgccgacgccgctgcaactgcacggcacgttgaacctgctg
actgaaaccggacaagtgatttttcgctacgccaaacctactgcacgcgactatctttct
gcatggcttgcacatctcgcctattgcgcggcgctgcccgacggcccgcgccgcacggtc
tggcacggcagcggtgagagcttcgagctcgcgcccgtcgctgccccgctcgaagaactc
gcgccgctcgccgcgctgttcaggtcggggcgcaggctaccgctgcgttttttcccgaag
agcgcgtgggcgaaggtgagcgaaagcgattcggcggcgcagggcgtatggatcaacgac
cgcgtgcgcggcgagtccgacgaccccgcattgcgcatcgccctgcgagggacgccgctt
acgctcgacgaaccgtttggcagcctcgcgtcgatcgttttcaagccgttgctgcagcat
ctgcggagcgtgtcatga
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