Paraburkholderia caledonica: CUJ87_09815
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Entry
CUJ87_09815 CDS
T05740
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K22044
moderate conductance mechanosensitive channel
Organism
pcj
Paraburkholderia caledonica
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcj02000
]
CUJ87_09815
Transporters [BR:
pcj02000
]
Other transporters
Pores ion channels [TC:
1
]
CUJ87_09815
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
DUF2171
WTF
Motif
Other DBs
NCBI-ProteinID:
AXF14669
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Position
PHRS4_A:complement(2231553..2234237)
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AA seq
894 aa
AA seq
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MQSCPSRRESEAAPSNGGLFPIHAAFPRLFARIGLLIRRGACPPGTSRLSVWPVAIFVAL
FLWTAWFPTNAQAADATTGTPVIPALQSLINSATVAPASAASAASAADAASAPSPASQAE
IARSLDSVIATLDNDRQRSALVAQLKKLRDVSRTVGPLAPAPAQQSPGLLGAIASGIASF
ESDVHEGRTPVRYWGGRFNAAGNELYTIISGQGHESLGRILFSMFAMLAGWGACAAALIY
LQHRLYRRLGIVIGLNPNPTTRELLIFALRRVGPWVIAFVAALLFVRAMPDALGRTLGMV
VAYAIVAGAVFSAICLIMFSLFGSGHRRTAVRLLIDHARRLLFAVGVCGALGDAAVNYDV
AHQMGSNLAALVSTAANMTAAVLTGYFALAFRRPVAHLIRNRPYDQRNDHKAATDAFDVL
AALWHVPVLVLAAASVVATLGGSGSSENVLQISVVTALLLVLAFFLSAIVLRMTRPRSAR
ARRRSPYLTRLLRFCGTLLTLFIWLFFFELAARLWGVSLAAVVEENVAARGIAHAVTAIV
ATVFIAWLLWILVDTAITEALNPGSTRNKSRGPSMRARTMLPLVRNVLLVSIMTIAGIVT
AANLGINVTPLLAGAGVIGLAIGFGAQSLVTDLITGLFIIIEDTISVGDWIDVDGGHAGT
VEHLSIRTVRLRDGQGAIHAIPFSQIKIVKNLSRDFAYAVFEVRMSFSTDVDEITQLIRE
VGADLMADFRYRREMLGPIEVWGLDRFDPNWMVVKGQIKTRPLQQWSVARAFNLRLKRKM
DEAGIEIPVPQMRVFTSSKDSEGQPLHDEDVLGVAPHEHADAHSHARADAHAEGRARQHE
HAVGHQEKAPPIRGAHPAVVAARDVSHEPRPAPPPTGQTAPIPPQIPTAGEGKA
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcatgcccgtcgcggcgtgagtctgaggctgcgccgtcaaacggcgggcttttc
ccgattcacgctgcatttccccgtctttttgcccggatcggattgctgatccgtcgcggc
gcgtgcccgcccggcacgagccggcttagcgtatggccggtcgcgatcttcgtcgcgctc
tttctttggaccgcgtggttccccaccaacgcgcaggcagccgacgcgaccaccggcacg
cccgtcatcccggcgttgcaaagcctgatcaacagcgcgaccgtggcgcccgcttcggcg
gcgtccgccgcgtcggctgcggacgccgcttcggcgccgtcgcccgctagccaggcggag
atcgcgcgttcgctcgacagcgtgatcgccacgctcgacaacgaccggcagcgcagcgcg
ctcgtcgcccagttgaagaagctgcgcgacgtctcccgaaccgtcggcccgctcgcgccc
gcgccggcgcagcagagccctggtctgctcggcgcgattgcgtcgggcatcgcgtcgttc
gaatcggacgtgcatgaaggccgcacgcccgtgcgctactggggcgggcgcttcaacgcg
gccggcaacgagctctacacgatcatctcgggccagggccacgaaagcctcggccgaatc
ctcttttcgatgttcgcgatgctggccggctggggcgcatgcgcagccgcgctgatttat
ctgcagcacaggctctatcggcgacttggcatcgtaatcggcctcaatccgaatcccact
acgcgggagttgctgatcttcgcgttgcggcgcgtcgggccgtgggtcatcgcgttcgtc
gccgcgctgctgttcgtgcgcgcgatgcccgatgcgctcgggcgcacgctcggcatggtc
gtcgcgtatgcgattgtcgcgggtgccgtgttttcggcgatctgtctgatcatgttttcg
ctgttcggctcgggacaccggcgaaccgcggtacgtttgctgatcgatcatgcgcggcgc
ctgctgtttgcggtcggcgtctgcggcgcgctcggcgatgcggccgtcaattacgacgtc
gcgcatcagatgggctcgaatctggccgcactggtttcgaccgccgccaacatgacggcc
gccgtgctgaccggctatttcgcgctcgcgtttcgccggccggtcgctcatctgatccgc
aaccggccttacgaccaacgcaacgatcataaagcggcgaccgatgctttcgacgtgctc
gccgcgctctggcacgtgcctgttctcgtgctggcggcagcctcggtggtcgccacgctc
ggcggctccggttcgagcgagaacgtgctgcaaatctcggtggtgaccgcactgctgctg
gtgctggcgtttttcctttcggccatcgttttacggatgacgcgtccacgcagcgcgcgc
gcgcggcggcgctctccgtatctgacgcggttgctgcgtttttgcggcactttgctgacg
cttttcatctggctgtttttcttcgagctggcggcccgattgtggggcgtttcgcttgcg
gcggtcgtcgaggaaaacgtggccgcgcgcggtatcgcgcatgcggtgacggcgatcgtg
gccaccgtgttcattgcgtggctgctgtggattctcgtcgacaccgcgatcaccgaggcg
ctcaaccccggcagtacgcgcaacaagtcgcgcggtccgagcatgcgggctcgaacgatg
ttgccgctcgtgcgcaatgtgctgctcgtcagcatcatgacgatagcgggcatcgttacg
gcggcgaatctcggcatcaacgtgacgccgctgctcgcgggcgccggagtgatcggcctt
gcgatcggtttcggcgcgcagtcgctcgtgaccgacctgattacggggcttttcatcatc
atcgaagatacgatttcggtgggcgactggatcgacgtggacggcggtcatgcaggcacg
gtcgagcatttgtccatccgcaccgtgcggttacgcgacggccagggcgcgatccacgca
attccgttttcgcagatcaagatcgtcaagaacctgtcgcgcgactttgcctacgcagtg
ttcgaagtgcggatgtcgttctcgaccgacgtcgatgaaatcactcaattgattcgcgaa
gtcggtgccgatctgatggccgacttccgttaccgtcgcgagatgctggggccgatcgag
gtgtgggggctcgaccgtttcgacccgaactggatggtcgtcaaagggcagatcaagacg
cggccgctgcagcaatggagcgtggcgcgcgcgttcaatctgcggctcaagcgcaagatg
gacgaggccggcattgagatcccggtgccgcagatgcgcgtgttcacgtcgtcgaaagac
agcgaggggcagcctttgcatgacgaagacgtgctcggggtcgcgccgcatgagcatgcg
gatgcacactcgcatgcccgcgctgatgcccacgcggaaggacgtgcgcgtcagcacgag
catgcagtcgggcatcaggagaaagcgccgccgatacgcggcgcgcatccggctgtcgtc
gcagcgcgcgatgtgtcgcatgagccacggccggcgccgccgccgacgggacagaccgcg
ccaattccgccgcagattcccacggcgggcgagggcaaggcttga
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