Paraburkholderia caledonica: CUJ87_11665
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Entry
CUJ87_11665 CDS
T05740
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pcj
Paraburkholderia caledonica
Pathway
pcj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CUJ87_11665
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcj01007
]
CUJ87_11665
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcj03016
]
CUJ87_11665
Enzymes [BR:
pcj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
CUJ87_11665
Amino acid related enzymes [BR:
pcj01007
]
Aminoacyl-tRNA synthetase
Class II (U)
CUJ87_11665
Transfer RNA biogenesis [BR:
pcj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CUJ87_11665
Prokaryotic type
CUJ87_11665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
B5
tRNA_bind
FDX-ACB
VapB_antitoxin
Motif
Other DBs
NCBI-ProteinID:
AXF14986
LinkDB
All DBs
Position
PHRS4_A:complement(2665843..2668278)
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AA seq
811 aa
AA seq
DB search
MQFPESWLRTFVDPQLTTDELSHALTMAGLEVEDLRPAAPPTSKIVVGQVLEVVKHPDAD
KLNVCQVNAGTGATLNIVCGAPNVAPGIKVPVALVGAQLPPAEEGGAPFAIKLSKLRGVE
SQGMLCSARELKLSEDHSGLLILPEDTPIGQDIRETLKLDDTIFEIKLTPNKADCLSVFG
VARETSAITGAPLRPLEIKPVQVKLDETLPVKISAPDLCGRFSGRVIRGVNARAKSPQWM
VERLERSGQRSISALVDISNYVMLELGRPSHVFDLDKIHGGMDVRWGCKGETLKLLNGNT
VEVDETVGVIADEQHIESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRSRKYNFST
DAGHRFERGVDYATTVEHIERITQLILDICGGEAGPVDDQVVNVPQREPVKMRVSRANRI
IGIAIGAEEIAQIFTRLGLAFERDGDTFSVMPPSYRFDIEIEEDLIEEVARIYGFEKIPA
RPPIAKSEMRATNETRRSIHAIRHALAARDYAETVNFSFVDAEWEQDFAGNDKPVRLLNP
IASQLSVMRTTLIGSLIHVLRTNLNRRAADRVRVFEAGRVFLHDPSIKAGELTVEGFAQP
KMIGGLAYGPALEEQWGAPSRTVDYFDVKADVEALLAPAVARFVKAEHPALHPGRSARIE
LNGRAIGWIGELHPRWMQKYDLPNAPILFEVEADALMQRVLPTPSEVSKFPPVRRDIAVV
VDQKIEAQALLDELQKAQSEPACKTVQKVVLFDEFRPKSNTSGGLGAHEKSLAFRVTLQD
TGGTLQDETVDLAIQTLVERLARVYGARLRG
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcccggaatcctggctgagaacctttgtcgatccgcaactgacgacggacgag
ctgtcgcacgcattgacgatggcgggtctcgaagttgaagacttgcgacccgctgcgcca
ccgacctcgaagatcgtggtcggtcaggtgctggaggtcgtcaagcacccggatgcggac
aagctgaacgtctgccaggttaacgccggcacgggcgccacgctcaatatcgtctgcggt
gcgccgaacgtagcgccaggcatcaaggtgccggttgcgctggttggcgcgcaactgccg
ccggccgaagagggcggcgcgccgttcgcgatcaagctctcgaagctgcgtggcgtggaa
agtcagggcatgctttgctcggcgcgcgaactgaagctctcagaagatcatagcggcctc
ctcatcctgccggaagatacgccgatcggccaggacatccgcgaaacgctcaaactcgac
gacaccattttcgaaatcaagctgacgccgaacaaggcagattgcttgtcggtgttcggc
gtggcgcgcgaaacctcggcgatcaccggcgcaccgttgcgtccgctcgagatcaagccg
gtccaggtcaagctcgacgagacgctgcccgtcaagatctcggcgcccgatctttgcggc
cgtttctcgggtcgtgtcatccgcggtgtgaatgcgcgtgcgaaatcgccgcaatggatg
gtcgaacgtcttgagcgttcaggtcagcgcagcatctccgcgctcgtggatatttccaat
tacgtgatgctcgagctgggccgtccatcgcacgtgttcgatctggacaagatccacggc
ggtatggacgtgcgttggggctgcaagggcgaaacgctcaagctgctgaacggcaacacc
gtcgaggttgacgaaacggtcggcgtgatcgccgacgagcaacacattgaaagcctcgcg
ggcatcatgggcggcgacagcacggccgtcacgctcgacacgaccaacatctaccttgaa
gccgcattctggtggcccgatagcattcgcggccgctcgcgcaagtacaacttctcgacc
gatgcgggccatcgtttcgagcgcggcgtcgattacgcgaccaccgtcgagcacatcgag
cggatcacccaacttatcctcgacatttgcggcggcgaagcgggtcctgtggacgaccag
gtcgtcaatgtgccgcagcgcgagcccgtgaagatgcgcgtgtcccgcgcgaaccgcatc
atcggcatcgcgatcggcgcagaggaaatcgcgcagatctttacgcgtctcggccttgcg
ttcgaacgcgacggcgacacgttctcggtcatgccgccgtcgtaccgtttcgatatcgag
atcgaagaagacctgatcgaagaagtcgcgcgtatctacggcttcgagaagattccggcg
cgaccgcctatcgctaagagcgaaatgcgcgcgaccaacgaaacgcgccgctcgatccac
gcaatccgacacgcgcttgccgctcgcgattacgctgaaacggtcaacttcagtttcgtg
gatgccgaatgggagcaggacttcgccggcaatgacaagcctgtgcgtctgctgaatccg
attgcgagccagttgtcggtcatgcggaccacgctgatcggcagcctgattcatgtgctg
cgcaccaacctgaaccgccgtgctgccgaccgcgttcgcgtgttcgaagctggccgcgtg
ttcctgcacgatccgtcgatcaaggccggggagctcacggtcgaaggcttcgctcagccg
aagatgatcggcggcctcgcgtacggtcccgcgcttgaggagcagtggggcgcgccgtcg
cgtaccgtcgactatttcgacgtgaaggccgacgtcgaggcgttgctcgcgccggcagtc
gcgcgtttcgtgaaagcggagcatcccgcgctgcatccggggcgcagcgctcgcatcgaa
ctgaatggccgcgccattgggtggattggcgaactgcatccacgctggatgcaaaaatat
gatttaccgaatgcgccgattctgtttgaagtcgaagcggacgcattaatgcaacgcgta
ttgcccacaccgtcggaagtgtctaaattcccgccggtgcgtcgcgatatcgcggtagtt
gtcgatcagaaaatcgaggcgcaggcgctgctggacgagctccagaaggctcagtcggag
cccgcctgcaagaccgtccagaaggttgtgcttttcgacgaattccgtccaaaatcaaac
acttccggtggcttgggggctcacgagaaaagccttgcgttccgtgttaccttgcaagat
actggcgggacccttcaggacgaaacggtcgatctggccattcagactctggtggaacgt
ctggctcgagtatatggcgcacggttgcgcggataa
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