Paraburkholderia caledonica: CUJ87_12220
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Entry
CUJ87_12220 CDS
T05740
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pcj
Paraburkholderia caledonica
Pathway
pcj03030
DNA replication
pcj03430
Mismatch repair
pcj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CUJ87_12220
03430 Mismatch repair
CUJ87_12220
03440 Homologous recombination
CUJ87_12220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcj03032
]
CUJ87_12220
03400 DNA repair and recombination proteins [BR:
pcj03400
]
CUJ87_12220
Enzymes [BR:
pcj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CUJ87_12220
DNA replication proteins [BR:
pcj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CUJ87_12220
DNA repair and recombination proteins [BR:
pcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CUJ87_12220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AXF15079
LinkDB
All DBs
Position
PHRS4_A:2794043..2794777
Genome browser
AA seq
244 aa
AA seq
DB search
MRQLILDTETTGLNARTGDRILELGCVELVNRRLTGNNLHFYINPERDSDPGALAVHGLT
TEFLSDKPKFAEIADQFRDFIQDADLIIHNAPFDIGFLDAEFALLGLPPVSTYCGEIIDT
LARAKQMFPGKRNSLDALCDRFGISNAHRTLHGALLDSELLAEVYLAMTRGQESLVIDML
GESHGSGEAHAPRVAIDSLDLVVIAASDEELAAHQAVLDGLDKAIKGTSVWRLEPVPVSD
EQAA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaacttatcctcgatactgaaacaaccggcctgaatgcccggaccggcgaccgc
atcctcgaactgggttgcgtcgagctggtgaaccggcgcctcaccggcaacaatctgcac
ttctatatcaaccccgagcgcgacagtgatccgggcgcattggcggttcacgggctgacc
accgagttcctgagcgacaagccgaagttcgccgagatcgccgatcagtttcgtgacttc
attcaggacgcggacctgatcattcacaacgcgccgttcgacatcgggttcctggacgcc
gaattcgcgttgctcgggctaccgcccgtcagcacctattgcggcgagatcatcgacacg
ctcgcgcgcgcgaagcagatgttccccggcaagcgcaattcactcgacgctttgtgcgac
cgcttcggcatcagcaatgcacaccgcacgctgcacggcgccctgctcgactcggaactg
ctggccgaggtttatctggcgatgacacgcggccaggaaagccttgtcatcgacatgctt
ggcgaatcgcacggcagcggcgaagcgcatgcgccgcgcgtggccatcgactcgctggac
ctcgtcgtgattgccgcgagcgacgaagaactcgccgcacaccaggcggttctggatggc
ctcgacaaagcgatcaaaggcacgagcgtgtggcgcctcgaacccgtgcccgtatcggat
gagcaagctgcttaa
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integrated database retrieval system
