Paraburkholderia caledonica: CUJ87_12370
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Entry
CUJ87_12370 CDS
T05740
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pcj
Paraburkholderia caledonica
Pathway
pcj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CUJ87_12370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcj03019
]
CUJ87_12370
03009 Ribosome biogenesis [BR:
pcj03009
]
CUJ87_12370
03036 Chromosome and associated proteins [BR:
pcj03036
]
CUJ87_12370
Enzymes [BR:
pcj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CUJ87_12370
Messenger RNA biogenesis [BR:
pcj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CUJ87_12370
Ribosome biogenesis [BR:
pcj03009
]
Eukaryotic type
90S particles
RNase
CUJ87_12370
Prokaryotic type
rRNA processing factors
CUJ87_12370
Chromosome and associated proteins [BR:
pcj03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CUJ87_12370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AXF15102
LinkDB
All DBs
Position
PHRS4_A:complement(2822802..2824145)
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AA seq
447 aa
AA seq
DB search
MPSSPLESRLRYEFRNAELLRQALTHRSHSSTHNERLEFLGDSVLNCAVAALLFQRFGKL
DEGDLSRVRANLVKQQSLYEIAQALNISEGLRLGEGELRSGGFRRPSILADTLEAVLGAV
FLDGGFEAAQTVIKRLYVPILDHIDPRTLGKDAKTLLQEYLQGHKIALPTYTVVATHGAA
HNQQFEVECTVPKLDVKVSGSGASRRAAEQAAAKKALDEVLAAAPAVVGKSKRSKGARAA
KNVELEIVPGVTGVQTALDLRSPDRKSERGAAKGEPRVTSGTEPAAERSALAAVVAAAPL
AVIRAAHVEYSAPERADKGERLEKADRAEKFEKSDRAAAQPGDKSAEKSAGDKPADKLDA
RLAEARPVEPKPADPKTANASSADLKPAEPKPIDTKAESAVRGVDKPSRSREPASDAVSP
ATNTAAPTENETGVADAVQTRVADAGH
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgccctcatctccgttggaaagccgtctgcgctacgaatttcgcaatgcggaattgctg
cgccaggctttaacacaccgcagtcacagttccacgcataacgaacggctcgaatttctc
ggcgattccgttctgaattgcgcggtggctgcgcttttgttccaacgtttcgggaagctg
gacgaaggcgacttgtctcgcgttcgcgctaatctcgttaaacagcaatcgctttacgaa
atcgctcaggccctgaatatctccgaaggacttcggctcggggagggcgaactgcgcagc
ggcggcttccgtaggccgtcaatccttgctgacacgcttgaagcggtgctgggcgcagtg
ttcctcgacggcggtttcgaagccgcccagacggtcattaagcgcctgtacgtgccgatc
ctcgatcacatcgacccgcgtacgctcggcaaagatgcgaagacgctgttgcaggaatat
ctgcaaggtcacaagatcgcgttgcccacgtacaccgtcgtggccacgcatggtgcggcg
cacaatcagcaattcgaagttgaatgtacggtgccgaagctggacgtgaaggtctctggc
tctggcgccagtcggcgcgcggctgagcaggccgcagccaaaaaagcgctcgacgaggtc
cttgccgccgcgccggcagtcgtcggcaagtcaaagcgttcaaaaggcgcccgcgcagcg
aaaaatgtcgagcttgagattgtccccggcgtgactggcgtccagaccgccctcgacctg
cgcagcccggatcgtaagagcgagcgtggcgcggcgaagggagaaccgcgggtaacgtcc
ggaacagagcccgccgcggagcgcagcgctttggcggcggtggttgcggctgcaccgctg
gcggtgattcgcgcggcgcacgtcgagtacagcgccccggaacgcgccgataagggcgag
cgactggagaaagccgatagggcggaaaagttcgagaaatcggatagagccgccgcgcag
cctggcgacaaatcggcggaaaaatcagcaggggacaagccggcggacaagctggatgcg
cggttggccgaagccaggccagtagagccaaaacccgccgacccgaaaaccgccaacgcg
tcgtccgcagacctgaagccggccgaacccaagcccatcgacacaaaggcagagtccgcc
gtccgcggcgtagacaaaccgtcccgcagtcgcgagccggcgtccgacgctgtatcgccc
gcgacgaacactgcggcccccaccgaaaacgaaaccggcgtagccgacgcggtacaaacg
cgcgtcgccgacgcgggccattga
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