Paraburkholderia caledonica: CUJ87_12485
Help
Entry
CUJ87_12485 CDS
T05740
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
pcj
Paraburkholderia caledonica
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcj03009
]
CUJ87_12485
Enzymes [BR:
pcj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
CUJ87_12485
Ribosome biogenesis [BR:
pcj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CUJ87_12485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AXF16186
LinkDB
All DBs
Position
PHRS4_A:complement(2842780..2843817)
Genome browser
AA seq
345 aa
AA seq
DB search
MKELGKISQKSVTSAVASDQVSVIEIDDSAAGQRIDNFLLRVCKGVPKSHIYRILRSGEV
RVNKGRIDAQYRLELGDLVRVPPIRVAQPNEAVAQAPVPSAEFRTIFEDEHLLVIDKPAG
VAVHGGSGVAFGVIEQMREARPQAKFLELVHRLDRETSGILMLAKKRSALVNLHDQIREN
RMDKRYYACVHGEWASDWGRRRAVKEPLHKYLTADGERRVRVQADGLASHTVFNLIDRWP
DYALLEAELKTGRTHQIRVHLQHLELPIVGDAKYGDFALNKALARANAKPGLKRMFLHAY
RLKLTHPATGAPLQLEAPLPAECRNFIAQLNELRNGSHPETAPHG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagttaggcaaaatatcccagaaatcggtgacaagcgcggtcgcgagcgatcag
gtctcagtgatcgagatcgacgacagtgcggccggacagcgcatcgacaactttctgttg
cgagtctgtaaaggcgtccccaagagccacatttatcgcatcctgcgtagcggggaagtg
cgtgtgaacaagggccggatcgacgcgcagtaccggctcgaactcggcgatctcgtgcgc
gtgccgcccattcgcgtcgcgcagcccaatgaggcggtggcgcaggcgccggtgcccagc
gctgagttcaggaccattttcgaagacgaacacctgctcgtcatcgacaagccggcgggt
gtcgcggtgcacggcggcagcggcgtcgcgttcggcgtgatcgagcagatgcgcgaggcg
cggcctcaggcgaaattcctcgaactggtgcatcggctggatcgcgagacctccggcatc
cttatgctcgccaagaagcgttcggcgctcgtgaatcttcacgaccagattcgcgagaac
aggatggataagcgctactatgcgtgcgttcatggcgaatgggcgagcgactgggggcgc
cgccgcgccgtcaaggagccgctgcacaaatacctgaccgcggacggcgagcggcgcgtg
cgcgtgcaggccgacggtctggcgtcgcacacggtcttcaatctgatcgaccgttggccc
gactacgcgttgctcgaagcagagttgaagacgggccgcacgcatcagatccgcgttcat
ctgcagcatctggaactgccgatcgtcggcgatgccaaatacggcgacttcgcgctgaac
aaggcgctggctcgcgcgaatgccaaacccgggctcaagcgtatgttcctgcatgcttac
cggctgaagctaacgcacccggcaaccggcgcgccgctgcaactggaggcgccgttgccg
gccgaatgccgcaatttcatcgcgcagctcaacgaattacgaaatgggtcacacccggag
acggcaccgcatggctag
DBGET
integrated database retrieval system
