Paraburkholderia caledonica: CUJ87_12585
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Entry
CUJ87_12585 CDS
T05740
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pcj
Paraburkholderia caledonica
Pathway
pcj03420
Nucleotide excision repair
pcj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CUJ87_12585
03430 Mismatch repair
CUJ87_12585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcj03400
]
CUJ87_12585
Enzymes [BR:
pcj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CUJ87_12585
DNA repair and recombination proteins [BR:
pcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CUJ87_12585
MMR (mismatch excision repair)
Other MMR factors
CUJ87_12585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
HHH
ResIII
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AXF15136
LinkDB
All DBs
Position
PHRS4_A:complement(2862635..2864764)
Genome browser
AA seq
709 aa
AA seq
DB search
MLSVAETPSPSDTAAWLAKLNDAQREAVEFGTDAPHSTSGALLVIAGAGSGKTSTLAHRV
ANLMVKGADPRRILLLTFSRRAALEMTRRVTRIATTALGTRASLAQGLTWAGTFHSVGAR
LLREYAELIGLAPAFTINDREDSADLMNLVRHELGLSAKERRFPAKGTCFAIYSRVVNTG
ASLGQVLDSAFPWCREWEADLRMLFAAYVDAKQKQSVLDYDDLLLYWSHMAAEPAIAADL
SARFDHVLVDEYQDTNRLQASILLALKPDGRGLTVVGDDAQSIYSFRGATVRNILDFPAH
FDPPAVQVTLERNYRSTEPILAASNAVIELASERYTKNLWTDKASAQRPRLVTVADEADQ
ARYIVEQVLEAREQGMTLKSQAVLFRAAHHSAALEIELTRRNIPFVKFGGLKFLDSVHVK
DVLAVLRWAENPRDRVAGFRVVQLLPGVGPATAARVLDEIVARAGVGNPADTAGGTLAAF
APPPRAQEDWHPFVRLMSSVYGRQTPWPAEFEMVRRWYEPHLERNHEDAAIRDADLLQME
SIAGTYASRERFLTELTLDPPDATSDESGVPLIDEDYLILSTIHSAKGQEWRNVFVLNGV
DGCIPSDLGTGSEEEIDEERRLLYVAMTRAKEDLHIVVPQRFYVHNQTHMGDRHVWASRT
RFIPAHLMPLFDAYAWPRVPVPSAPTAAGLAAAAQAKIEIGARLRKMWD
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
gtgctttccgtcgccgaaacgccgtcgccgtccgataccgccgcctggcttgcgaagctg
aacgacgcgcagcgcgaggccgtcgaattcggcaccgacgcgcctcattcaacgtcgggc
gccttgctggtcattgcgggcgcgggctccggcaagaccagcacgcttgcgcaccgtgtg
gccaatctgatggtgaagggcgccgatccgcgcagaatcctgctactgacgttttcgcgt
cgcgcggcgctggaaatgacacgccgcgtcacacgcatcgccacgacggcgctcggcacg
cgcgcgtcgctcgcgcaagggctgacatgggcgggcacgttccatagcgtcggcgcgcgg
cttctgcgcgaatacgcagaactcatcggtcttgcaccggcctttacgatcaacgaccgt
gaggattccgccgacctgatgaatctggtgcggcacgaactgggtctgtccgcgaaagaa
cggcgttttccggctaagggaacctgtttcgcgatttactcgcgcgtcgtgaacaccggc
gcgtcgctcgggcaggtgctggatagcgcgttcccgtggtgccgcgagtgggaagccgat
ctgcgcatgctgtttgctgcctacgtcgacgcgaagcagaagcagagcgtactcgattac
gacgacctgctgctttactggtcgcatatggccgcggagccggcgattgccgcggatctg
tcggcgcgcttcgatcacgtgctggtcgacgaatatcaggacaccaaccggctgcaggcg
tcgattctgctcgcgctgaagccggacggacgcggcctgaccgtggtcggcgacgacgca
cagtcgatctattcgtttcgcggcgctaccgtgcgcaatattctcgatttcccggcgcat
ttcgatccgcccgcggttcaggtcacgctcgaacgcaattaccgctcgaccgagccgatt
cttgccgcgtcgaacgcggtgatcgaactggccagcgagcgctatacgaagaacctgtgg
accgacaaggcgtcggcgcagcggccccggctcgtcaccgtcgccgacgaggccgaccag
gcgcgttacatcgtcgagcaggtgctcgaggcgcgcgagcagggcatgacactgaagtcg
caagcggtgctgtttcgcgccgcgcatcacagcgcggcgctcgagatcgaactcacgcgg
cgcaacattccgttcgtgaagttcggcggcctgaagttcctcgattccgtgcacgtcaag
gacgtactggcggtgcttcgttgggccgagaatccgcgcgaccgtgtggccggttttcgc
gtcgtacagctattgcccggcgtggggccggccacggccgcgagagtgctcgacgaaatc
gtcgcgcgcgccggcgtgggcaatcccgcggacaccgcgggcggaacgctcgccgcgttc
gcgcccccgcctcgcgcgcaggaggactggcatcccttcgtcaggctgatgtcgagcgtg
tatgggcggcagacgccgtggcctgcggagttcgagatggtgaggcgctggtacgagccg
catctggagcgcaatcatgaagacgccgcaatccgtgatgccgacctgttgcagatggaa
agcattgcgggcacgtatgcgtcgcgcgagcgctttctgacggagctgacgctcgatccg
cccgacgccacgagcgacgaatcgggcgtgccgctcatcgacgaagactatctgatcctg
tccaccatccattcggcaaagggacaggaatggcgcaacgtgttcgtgctgaacggggtc
gacggctgcattccgtccgatctgggtaccggcagcgaagaggaaatcgacgaagaacgc
cgcctgctctacgtggcgatgacgcgcgcaaaggaagacctgcatatcgtcgtgccgcag
cgcttctacgtgcacaaccagacgcatatgggcgatcgtcacgtgtgggcgtcgcgcaca
cgctttatcccggcgcacctgatgcctttgttcgacgcgtacgcatggccgcgcgtgccg
gtgcccagtgcgccgacggccgcggggcttgccgcggcggcgcaggcaaagatcgaaatc
ggagcaaggctcaggaaaatgtgggactga
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