Paraburkholderia caledonica: CUJ87_12885
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Entry
CUJ87_12885 CDS
T05740
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pcj
Paraburkholderia caledonica
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcj03032
]
CUJ87_12885
03400 DNA repair and recombination proteins [BR:
pcj03400
]
CUJ87_12885
Enzymes [BR:
pcj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CUJ87_12885
DNA replication proteins [BR:
pcj03032
]
Prokaryotic type
DNA Topoisomerases
CUJ87_12885
DNA repair and recombination proteins [BR:
pcj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CUJ87_12885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AXF15190
LinkDB
All DBs
Position
PHRS4_A:complement(2928085..2930721)
Genome browser
AA seq
878 aa
AA seq
DB search
MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEIRMAKIGHELLADIDKETVDFTPNYDGSENEPAILPARIPNLLINGSSGIAVGMAT
NIPPHNLNEVVDACQHLLRNPEATIDELIEIVPAPDFPTAGIIYGVAGVRDGYRTGRGRV
VMRALTHFEEIDRGQRMSIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG
MRVVIELKRGEVPEVVLNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEMLSCFLSHRRE
VLTRRTVYELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMARPWDSSLV
REMLSRAETENASAGGREAYRPDGLNPSFGMQSDGLYRLSDTQAQEILQMRLQRLTGLEQ
DKIIGEYRDVMAQIADLLDILARPERITAIIVDELTSIKSEFGDARRSKIELNATELNTE
DLITPQEMVVTMSHAGYVKSQPLSEYRAQKRGGRGKQATSMKEDDWIDTLFIANTHDHIL
CFSNRGRVYWVKVYEVPQGSRNSRGRPIVNMFPLLEGEKITVVLPVKEFSADKFVFMATA
LGTVKKTPLEAFSRPLRKGIIAVGLDDGDYLIGAAITDGQHDVMLFSDSGKAVRFDENDV
RPMGREARGVRGMQLEDGQNVIALLVAGDEQQSVLTATENGFGKRTPITEYTRHGRGTKG
MIAIQTSERNGKVVAATLVDQEAQIMLITNTGVLIRTRVSEIREMGRATQGVTLISLDEG
TKLSGLQQVAEAEADVDVEGDAEGPADGSNDVEDGGAA
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgccaaagagactctgccaatctccctagaggaggaaatgcgccgttcg
tatctcgattacgcgatgagcgtgatcgtagggcgtgcgcttcccgacgttcgcgatggc
ctgaagccggtccaccggcgcgtgctttacgcgatgcacgaactgaacaacgactggaac
cgcgcgtacaagaagtcggcgcgtatcgtcggcgacgtcatcggtaagtaccacccgcac
ggcgacacggctgtatacgacaccatcgtccgaatggcgcaggacttctcgctgcgctac
atgctcgtagacggccagggcaacttcggttcggtcgacggcgataacgccgcggccatg
cgatacaccgaaatccgcatggccaagatcggccacgagctgcttgccgacatcgacaag
gaaacggtcgacttcacgccgaactacgacggcagcgagaacgagccggccattctgccc
gcgcgcattcccaatctgctgatcaacggctcgtcgggtatcgcggtcggcatggcgacc
aacattccgccgcacaacctgaacgaggtggtcgacgcatgccagcacctgctcaggaac
cccgaagccacgattgacgagctgatcgagatcgttccggcccccgattttccgaccgcc
ggcatcatctacggcgtggcgggcgtgcgcgacggctaccgaaccggccgtggccgcgtg
gtaatgcgcgcgctgacgcacttcgaagagatcgatcgcggccagcgcatgtcgatcatc
gtcgacgaattgccgtatcaggtgaacaaacgctcgcttctcgagcgtattgccgaactc
gtcaacgagaaaaagctggaaggcatctccgacatccgcgacgagtccgacaagagcggt
atgcgcgtcgtgatcgagctgaagcgcggcgaagtgccggaagtcgtcctgaacaatctg
tacaaggcgacccagcttcaggacactttcggcatgaacatggtcgcgctggtcgacggc
cagccgaagctgctgaatctgaaggagatgttgtcgtgcttcctgtcgcatcgccgggaa
gtgctgacgcggcgcactgtttacgaactgcgcaaagctcgcgaacgtgggcatgtgctc
gagggtctggccgttgcgctcgccaatatcgacgagttcatcgcgatcatcaaggccgcg
ccgactccgcccatcgcaaagcaggaattgatggcgcgtccgtgggattcctccctggtg
cgagaaatgttgtcgcgcgccgaaacggaaaacgcgtcggccggtggccgcgaagcctat
cgtcctgacggattgaatccgtccttcggtatgcagtcggacggtctctaccgcttgtcc
gacacccaggctcaggaaattctgcagatgcgtctgcaacggctgaccggcctggagcag
gacaagatcattggcgagtatcgcgacgtcatggcgcagatcgccgatctgttggacatc
ctggcgcgcccggagcggattacggcgatcatcgtcgacgaactcacgtcgatcaagtcg
gaattcggcgacgcgcgccgctcgaagatcgaactgaacgcaaccgagctaaacaccgaa
gatctgatcacgccgcaagaaatggtcgtgaccatgtcgcacgccggttacgtcaaatcg
cagccgttgtccgaatatcgcgcccagaagcgcggcggtcgcggcaagcaggcgacttcc
atgaaggaagacgactggatcgacacgctgttcatcgcgaacacgcacgaccatattctg
tgcttctcgaaccgcggccgtgtttattgggtcaaggtctacgaagtgccgcagggttcg
cggaactcgcgcggtcgtccgatcgtcaatatgttcccgctgctggaaggcgagaagatc
acggtcgtgctgccggtcaaggaattttccgcagacaagttcgtgttcatggcaacggcg
ttaggaacggtaaagaagacgccgctcgaagccttcagccgaccgttgcgcaagggtatt
atcgcggtcggtctcgatgacggcgattacctgatcggcgccgctatcacagacggtcaa
cacgacgtcatgctgttctccgattctggcaaggcagtccgcttcgacgaaaacgacgtg
cggccaatgggacgcgaggcgcgcggcgtgcgcggcatgcagctcgaagacggacagaac
gtgatcgcgttgctggtggcgggcgacgagcagcagtcggtgctcacggctacggaaaac
ggcttcggcaaacgcacgccgatcacagagtacacgcgtcacggtcgcggcacgaagggc
atgatcgcgatccagacgtcggagcgcaacggcaaggtcgttgcggccacgctggtcgat
caggaagcgcagatcatgctgatcaccaatacgggcgtgcttatccgtacgcgcgtgtcg
gaaattcgagaaatgggccgtgcaacccaaggtgttacactcatcagccttgacgaaggg
accaagctttcaggtctgcaacaggttgccgaagcagaagcagacgtcgatgtggaaggc
gacgccgaaggtcccgccgacggcagcaacgacgtcgaagacggcggtgcggcctga
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