Paraburkholderia caledonica: CUJ87_12890
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Entry
CUJ87_12890 CDS
T05740
Name
(GenBank) hypothetical protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pcj
Paraburkholderia caledonica
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcj02000
]
CUJ87_12890
Transporters [BR:
pcj02000
]
Other transporters
Pores ion channels [TC:
1
]
CUJ87_12890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
DUF3761
DUF748
Motif
Other DBs
NCBI-ProteinID:
AXF15191
LinkDB
All DBs
Position
PHRS4_A:2931209..2931856
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AA seq
215 aa
AA seq
DB search
MNKLSKLAFIAATAVMAASAMAQSVPASRQATNDNWVNGTGEYVWMNGTNELCWRDAFWT
PATANAKCDGALVAQAPTPPAPVAPAPAITSQKITYQADALFDFDKAILKPAGKEKLDDL
ASKIQGLNLEVVVATGYTDRIGSDKYNDRLSLRRAQAVKAYLVSKGIESNRIYTEGKGKR
NPVTTGCNQKNRKQLIACLAPDRRVEVEVVGTSKQ
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaataaactttcaaagctcgcgttcattgcagctaccgcagttatggctgcatccgca
atggcacagtcggtgccggcgtcgcgacaagctaccaatgacaactgggtgaatggtact
ggcgaatacgtgtggatgaacggcacgaacgagctttgctggcgcgatgcattctggacg
ccggcaacggctaacgcaaagtgcgacggcgcactggttgcccaagctccgacgccgccg
gcaccggtcgcaccggcaccggccatcaccagccagaaaatcacgtatcaggctgacgca
ctgttcgacttcgacaaggctatcctgaagccggctggcaaggaaaagctggacgatctg
gcatcgaagatccagggcttgaacctcgaagtcgtcgtggcaacgggttacacggaccgc
atcggttcggacaagtacaacgaccgtctgtcgctgcgtcgcgctcaagctgtgaaggca
tacctcgtcagcaagggcatcgaatccaaccgtatctacacggaaggcaagggcaagcgc
aacccggtcacgaccggttgcaaccagaagaaccgcaagcaactcatcgcctgcctcgca
ccggatcgtcgcgtggaagtcgaagttgtcggtacttcgaagcagtaa
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