Paraburkholderia caledonica: CUJ87_13230
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Entry
CUJ87_13230 CDS
T05740
Name
(GenBank) porin
KO
K03285
general bacterial porin, GBP family
Organism
pcj
Paraburkholderia caledonica
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
CUJ87_13230
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Gene cluster
GFIT
Motif
Pfam:
Porin_4
Porin_1
Motif
Other DBs
NCBI-ProteinID:
AXF15245
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Position
PHRS4_A:3006822..3007967
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AA seq
381 aa
AA seq
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MKKTLMVAALTGVFATAAHAQSSVTLYGLIDAGITYTNNQHGHSNWQQTSGSVNGSRWGL
RGAEDLGGGLKAIFTLENGFGINDGSLKQGGREFGRQAFVGLSSNQFGAVTLGRQYDSMV
DYVGPLALTGTQYGGTQFAHPFDNDNLNNSFRINNSVKYTSANYGGFKFGGLYGFSNQAD
GFANNRAYSAGASYNWGGLNVGAAYLQLNSNGATGAAAAFNSGGAVSSDNTFFAGRQQTW
GAGANYAFGPATVGLVYSQTNLSGLVGIGAGASGQPGGIGLPNNSAHFQNYEANARYALT
PAVSIAGSYTYTRASLAGTRPHWNQFNLQTAYALSKRTDVYLQGEYQQVNEGAIVGADIN
GLGASSNNKQVAVTAGLRHRF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagactctcatggtcgcggccctgacgggcgtttttgcaactgcggcgcacgct
caaagcagcgtcacgctctacggcttgatcgacgccggcattacgtacaccaacaaccag
cacggtcacagcaactggcaacagacgagcggttcggtgaatggcagccgttggggcttg
cgcggcgctgaagacctcggtggcggcctgaaggcaatcttcacgttggaaaacggcttc
ggcattaatgacggctcgctgaaacaaggcggtcgcgaattcggccgtcaggcattcgtt
ggtctgtcgagcaatcagttcggcgccgtcacgctcggccgtcaatatgacagcatggtt
gattacgttggcccactggcgctgaccggcacgcaatacggcggcacgcagttcgcccac
ccgtttgacaacgacaacctgaacaactcgttccgtatcaacaactcggtcaaatacacg
agcgcgaactacggtggcttcaagttcggcggcctgtatggcttctcgaaccaggctgac
ggcttcgcaaacaaccgcgcatacagcgcgggcgcgtcgtacaactggggcggcctgaac
gtcggcgcagcgtatttgcaattgaacagcaacggcgcgaccggcgcggctgcagcgttc
aactccggtggtgcggtgtccagcgacaacacgttcttcgctggccgtcagcagacgtgg
ggcgcaggcgccaactacgcgtttggtccggcaaccgtcggcctcgtctattcgcagacg
aacctgtcgggtctcgtcggcatcggcgcaggtgcatcgggccaacccggcggcatcggc
ctgccgaacaacagcgcgcacttccagaactacgaagcaaacgctcgttacgctttgacg
ccggctgtcagcattgcaggttcgtacacgtacacgcgtgcgagccttgcgggcacccgt
ccgcactggaatcagttcaacctgcaaacggcgtacgcactgtccaagcgcacggacgtt
tatctgcagggtgaataccagcaggtcaacgaaggcgccatcgttggtgctgacatcaac
ggtctgggtgcttcgagcaacaacaagcaggttgcggtcacggcaggtctgcgtcaccgc
ttctaa
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