Paraburkholderia caledonica: CUJ87_15035
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Entry
CUJ87_15035 CDS
T05740
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
pcj
Paraburkholderia caledonica
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CUJ87_15035 (ltrA)
Enzymes [BR:
pcj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
CUJ87_15035 (ltrA)
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
RVT_N
GIIM
HNH
Motif
Other DBs
NCBI-ProteinID:
AXF15556
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Position
PHRS4_A:complement(3383688..3385388)
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AA seq
566 aa
AA seq
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MKVSGRKTGSALSHAPDNWYAIDWRRVERNVRGMQIRIAKATRESDWRRVKALQRMLTRT
LSAKLYAVRRVTQNQGARTAGVDRELWDSPDSRWAAIGRLKRRGYKPLPLRRVFIPKANG
KERPLGIPTMRDRAMQALHLLALEPVSESTSDLNSYGFRLNRSTADAMAQIRVCMSQEAS
AKWVLEADIRGCFDHISHDWLENNVLMDRVILRKWLKAGLIYKGQLQATEAGTPQGGIIS
PTLANVTLNGLERELEAHLGAKLGIMKARRLKVNVVRYADDFVITGDSRELLECEVRPWV
EAFLAVRGLQLSEEKTRITHIDDGFDFLGWNFRKYSGKMLIKPSKKNAQAFYSKVAETIR
SNKTVKQEEMIRLLNPMLRGWAQYHHPVTAKKAYTHMEHLVFRRLWWWSKRRHPRKSSSW
VRQKYFHSIDARQWVFAVRTVRDDGSWGLMELYQLSGTTIRRHKKIQGEFNPFDPKWEQY
GEQLRQTRLWDSMRYRKQWAKLYMSQSGLCAHCGCALTDETGWHDHHLEYRMHGGSDKLS
NRVLLHPHCHQQVHVGKLVVTKPVLS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtatctggtcgaaagaccggatctgcgctttcccacgcgccggacaactggtac
gccatagattggcgacgggttgagcggaacgtgagagggatgcagattcgaattgcgaag
gcgacgcgggaaagcgattggcgaagggtgaaagccctgcaacggatgctgacccgcacg
ttgtctgcgaagctgtatgcggtacgacgtgttacgcaaaaccagggtgcgcgaacggct
ggagtcgatcgcgagctatgggattcgcctgacagccggtgggcagccatcggcaggttg
aagcggcgcggctacaagcctctgccattacggagagtctttatccccaaggccaatggg
aaggaacgccctctgggcattccgaccatgcgggacagggcgatgcaagctctgcatctg
ctggctttggagcccgtatcggagtcgacgagtgacctgaattcctacgggttcaggcta
aatcgttcgaccgctgatgcgatggcccaaatccgcgtttgtatgtcccaagaggcttct
gccaaatgggtcctcgaagcggatatcaggggatgctttgaccacatcagtcatgactgg
ttggaaaacaatgtcctgatggacagagtaatcctccggaaatggttgaaggctggcctg
atttataaggggcagctacaggcgactgaggccggtacgccgcagggaggcatcatctcc
ccgacgttggcaaacgtaacgctgaatgggctggagcgagaactggaggcgcacctcggt
gcaaaactagggatcatgaaagctcgaaggctcaaagtaaatgtggtgcggtacgcggac
gactttgtaatcaccggcgactcgcgtgagttgctggagtgcgaggtccgaccttgggta
gaggcattccttgcggttcggggactgcagttatcggaggagaagacgcggatcactcac
attgacgacggcttcgatttccttgggtggaatttccggaagtactcgggaaagatgctc
atcaaaccgagcaagaagaacgcgcaagcgttctacagcaaggtggcggaaacgattcgc
agcaacaagacggtgaagcaggaggagatgatccgactgctaaatccaatgttgcgcgga
tgggcgcagtatcaccatccggttacggccaaaaaggcgtacacccacatggagcatctg
gtgtttcggaggctctggtggtggtccaagcggcggcatccgcgaaagagcagcagttgg
gtgagacagaagtacttccactcaatcgacgctcgacagtgggtgtttgcggtccggacg
gttcgagacgatggcagttggggtctgatggagttgtaccaactcagcggtacgacgatc
aggagacacaagaagatccaaggagaatttaatccctttgatccgaagtgggagcaatat
ggcgagcaactgcggcagacgcgtctgtgggattcgatgcgctaccggaaacagtgggca
aagctgtacatgtcgcagagcgggctgtgtgcgcactgcggctgtgccttgacggacgaa
acagggtggcacgaccatcatctggaatatcggatgcatggcgggtcagacaagttgtcc
aaccgggtcttgcttcacccgcactgtcaccagcaggtacacgttggtaaacttgtagta
actaagccggttctgtcgtag
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