Paraburkholderia caledonica: CUJ87_17085
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Entry
CUJ87_17085 CDS
T05740
Name
(GenBank) bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
pcj
Paraburkholderia caledonica
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcj03016
]
CUJ87_17085
Enzymes [BR:
pcj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
CUJ87_17085
Transfer RNA biogenesis [BR:
pcj03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CUJ87_17085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
Pyr_redox
Pyr_redox_2
fvmX2
Lycopene_cycl
FAD_binding_3
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AXF15922
LinkDB
All DBs
Position
PHRS4_A:complement(3812572..3814551)
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AA seq
659 aa
AA seq
DB search
MTDPLIPAVLSFRDNGTPFSPLYDDIYHSAVGGLEQADHVFLRGNALPERWQGRRIFTVL
ETGFGMGINFLVTWAAWRADPARCERLHFVSTEKHPFTLADLRRAYAATIGDPAIAALAQ
MLADEWPMLVPGTHRIEFEDGRVVLTLAFGDAQQSLQTLRLRADAFYLDGFAPAKNPELW
TPAVFKSLARVAGEGATFSTYSSAGDIKRALTQCGFEYRKVEGFGWKRAMLVGHFAPRWR
VRRHEPPSPVGPLAPDERHAVVIGAGLAGCSVIERLAARGWRVTSLERHASVAQDASGNP
AGVFHPMISRDDSVASRVTRAGFLYALRRWAALERLGYAPSRGVPGLLQIAESDDEARSM
SEAIAALRYPPEFVTPISAADAQQLTGVPLARGGWLFPHGGSIDPASLCAAQCAAAGDLL
ERRFGVDVGRVERLGNRWSVFDTSGKELVRAPVVIVAGAHDAARIAGLQHAPTRSIRGQL
TLLPAGSAPSLGLPVIGDGYAIPLPNGVTLTGATYELDDADTSLRPSGHLENIGRVAQML
PAFADIAASADPAALAGRVAFRCVTSDRMPMVGNVADEALATRDAERLRGAWPLDLPRME
GLYSAFAYGSRGLVWAALGAELIASQIEGEPWPLERDLAEDIDPARFLLRALRQGSIAS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatccgctaatccccgccgtcctctcgttccgggacaacggcacaccgttttcg
cccctctacgacgatatctatcacagcgccgtcggcggtctggagcaggccgaccatgtg
tttctgcgcggaaatgcgctgcccgaacgctggcaagggcggcgcatcttcaccgtgctg
gaaacgggctttggcatgggcatcaacttcctggtgacctgggccgcgtggcgcgcagat
ccggcgcgttgcgagcgactccatttcgtatccactgaaaaacatccgttcacgctcgcc
gatctgcgccgggcttacgccgcgaccatcggcgatccagcaatagcggcgctcgcgcaa
atgctcgcagacgaatggccgatgctcgtgccaggcacgcatcggatcgagttcgaagac
ggacgtgtggttctcacgctggctttcggcgacgcccagcaaagcttgcagaccctgcgc
ttgcgcgccgacgcgttctacctggacggcttcgcgccggcgaaaaaccccgaactgtgg
acgcccgccgtcttcaagtcgctggcgcgggtcgcgggcgagggcgcgactttctcgacg
tacagcagtgccggcgacatcaagcgcgcgctgacccaatgcggcttcgagtatcgcaag
gtcgaagggttcggctggaagcgggcaatgctggtcggccacttcgcgccgcgatggcgc
gttcgccgtcatgaaccgccgtcgccggtcggaccattggcgcccgacgagcggcatgcg
gtcgtgatcggcgcgggtttggcgggatgctcggtgatcgagcggctggccgctcgcggc
tggcgcgtgacgtcgctggaacggcacgcgtcggttgcgcaagacgcgtcgggcaacccg
gccggcgtgttccatccgatgatttcgcgcgacgacagcgtcgcctcgcgcgtcacacgc
gctggctttctgtatgcgctcaggcgctgggcggcgctcgaacggctcggttacgcgccg
tcacgcggggtgccgggcctgctgcagattgccgaaagcgacgacgaagcacgctccatg
agcgaagccattgcggcgttacgctacccgccggagttcgtcacgccgatttccgccgcg
gatgcgcaacaacttactggcgtgccgctcgcgcggggcggctggctgtttccgcacggc
ggctcgatcgacccggcatcgctttgtgccgcgcaatgcgccgcggcgggcgatctgctc
gaacggcgctttggcgtagatgtaggacgcgtcgagcgtttgggcaatcggtggagcgtg
ttcgataccagcggtaaagaactggtgcgcgccccggttgtgatcgtcgccggggcacac
gatgcggctcgcatcgccgggttgcagcatgcgccgactcgcagcatacgcgggcaactc
actttgctgcccgcgggctcggcgccgtcgctcgggttgcctgtgatcggcgacggctac
gcgataccgctacccaacggcgtcacgctgacgggcgccacgtatgaactcgacgacgcc
gatacgtcgcttcggcccagcgggcatctggaaaatatcgggcgcgttgcgcagatgttg
cccgcgttcgcagatattgccgcgagtgccgatccagcagcgctcgccggccgagtcgca
tttcgctgcgtgacgagcgaccgcatgccgatggtcggcaacgtcgccgatgaagcgctc
gccacgcgcgacgccgagcgtttgcgcggcgcatggccgctagatttgccacgcatggaa
ggcctgtacagcgcgttcgcttatggctcgcgtggtctcgtgtgggcggcgcttggcgcg
gaactgatcgcctcgcagatagaaggcgagccttggccgctggagcgcgatctcgcggaa
gacatcgaccccgcgcgctttctgttgcgtgcgctgcggcagggaagcatcgccagttaa
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