KEGG   Paraburkholderia caledonica: CUJ87_19745
Entry
CUJ87_19745       CDS       T05740                                 
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
pcj  Paraburkholderia caledonica
Pathway
pcj03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcj00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CUJ87_19745 (icmF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcj02044]
    CUJ87_19745 (icmF)
Secretion system [BR:pcj02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CUJ87_19745 (icmF)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical DUF7942 Wzy_C
Other DBs
NCBI-ProteinID: AXF16670
LinkDB
Position
PHRS4_B:complement(543452..547321)
AA seq 1289 aa
MRRILNVLTHPRTLSIIGLLALAAVLFVGADTLQIDLMWPAIALGVVIALWLLVWAVRRL
RARRANRKLGEMLEQQAETQSTEAGPAPTPARQAELDVLRTRLVDAVKTIKTSKIGQVSG
GSALYELPWYIVIGNPAAGKSSAVLNSGLQFPFADKNNAVIHGIGGTRNCDWFFTTEGIL
LDTAGRYSVHEEDRTEWLGFLGLLKRFRPKAPINGIIVTASIAELTSSKPEFAINLAKNL
RQRVQELTEKLEVFAPVYVMFTKADLITGFTEFFSGSDRHEYDRVWGATLPYEPDEKRDV
VGLFDEHFEELYDGLKEISVAQMSINRGNKLSPGQLSFPLEFSTIKPALRAFLATLFETN
PFQYKPIFRGFYFTSALQEGETNSSAATRIANRFGLSADSMPKPHSAFSKNGFFLRDLFS
KVIFADRQTVKQFASPAKTRMRYATFFGFVAALALALGGWTWSTIGNQQLAENVKADLDN
VVRLQQNRNDLQSRLQAMDVLEDRIDQLEQFRRDKPLAVSFGLYQGGRLEERLLTEYYNG
VRQILLDPVSQNLASFLKEVNAHPDQLAPLNRTPDAAAIPVSAHTAMAANSQGGLYSDAS
PTNVEDAYNALKTYLMLSDKRHVETAHLTDQVARFWRGWLETNRGNMPRDEMIRSAERMI
TFYLSRVSDDDWPMIDQNLGLVDQTRENLRRVVRGMPARQRVYEEIKARASTRFAPMTIA
RIVGENNTSLVAGSYAIPGTFTREAWFQYVQPAIRDAATKELQAKDWVLNTSAHDDLTLE
GSPEQIQKALVTMYKTEYAMHWQKFMQGIAVQSFGSFGQAVDAMNRLGDPQDSPIRKVLE
TAYDQTSWDNPSLFNANLKRAQSGVTSWFKQWFARAPTGQLNANIDINGNPVELPMGPIG
QEFSALGRIVVTGDNGSMLKGYMDTLSKVRTRFNVIKNQGDPGPGARQLMQQTLDGSGSE
LADSLKYVDEQMLTGLTDSQRKALRPLLVRPLMAAYAVVIQPASVEVNKVWNAQVYQTFQ
SSLANKYPFAGDAKVEAGAGEIAQVFGPDGSIAKFVGTTLGPLAVRRGDTLTARTWGDMG
LALTPDFTNGFARWVAPLAGGAAGASAGQSSAEPQTVFQILPQPSSGTTEYTLAIDGQQM
RYRNTPPQWTNFVWPNPSGSPGATLNATTFDGRTLQLVNEPGRYGLEKLINSAQRKRRPD
GTFDLSWTQGNVTVAVSMRIISTSQASGSSSDAPQQQSLRGLRLPSSVADVSAAANSVTA
TATNMAAPASPAARPATAATAVSNTGSAQ
NT seq 3870 nt   +upstreamnt  +downstreamnt
atgcgacgcattctcaacgtgttgacccatccacgcacgctctcgatcatcggcctgctc
gcgctcgctgctgtgttgttcgtcggcgccgatacattgcagatcgacctgatgtggccg
gccatcgcactcggcgtggtgatcgcgctatggctgctcgtgtgggcggtgcgccgcctg
cgcgcgcggcgcgcgaaccgcaagctcggcgagatgctggaacagcaggccgagacacag
agcacagaggccggtcctgcgcccacgcccgcccgccaggcggaactcgacgtgctgcgc
acgcgcctcgtcgatgcggtcaagaccatcaagacctcgaagatcggtcaggtctcgggc
ggctccgcactctatgagttgccttggtacatcgtgatcggcaaccccgccgccggcaag
agcagcgcggtgttgaactcgggcttgcaatttcccttcgccgacaagaacaacgcggta
attcacggcattggcggcacgcgcaactgcgactggttcttcacgaccgagggcattctg
ctggataccgccggacgttactcggtgcatgaggaagaccgcaccgaatggctcggcttt
ctcggcctgctcaaacgcttccggccgaaagcaccgatcaacgggatcatcgtgacggcg
agcattgcggaactcaccagcagcaagccggaattcgcaatcaacctcgcgaagaacctg
cgccagcgtgtgcaggaattgaccgagaagctcgaagttttcgcgcctgtctacgtgatg
ttcacgaaggcagacctgattacgggcttcactgaatttttcagcggcagcgaccgtcat
gaatacgaccgcgtgtggggcgccaccctgccctacgaaccggacgagaagcgcgacgta
gtcgggcttttcgacgagcacttcgaagaactgtacgacggcctgaaagaaatcagcgtc
gcgcaaatgtcaatcaatcgcggcaataagctctcgccaggtcaactgagctttccactc
gaattctcgacgatcaagccggcattgcgtgctttccttgctacgttgtttgaaacgaac
ccgttccagtacaagccgatcttccgcggcttttatttcacgagtgcattgcaggaaggt
gaaaccaatagctccgcggccacgcgcatcgcgaaccgcttcggcctgagcgccgacagc
atgccgaagccgcatagcgcattctcgaagaacggcttctttctgcgcgatcttttttca
aaagtaattttcgcagaccggcaaacggtcaagcagttcgcaagccccgcgaaaacgcgc
atgcgttatgcaacgttcttcggtttcgtcgctgcgctggcgctcgcactcggcggctgg
acctggtcgaccatcggcaatcagcaactcgccgagaacgtgaaagccgacctcgacaat
gtggtgcgcctgcagcagaaccgcaacgatctgcaatcgcgcctgcaggccatggacgtt
ctcgaagaccgtatcgaccagttggaacagttccgccgcgacaagccgctcgccgtttca
ttcggtctgtaccagggcggccgtctcgaagaacgcctgcttaccgagtactacaacggc
gtgcgccagatcctgctcgatccggtttcgcagaacctcgcgtcgttcctgaaggaagtc
aacgcgcatcccgatcagcttgcgccgcttaaccgcacgcccgatgcggccgccattccc
gtctcggctcacacggccatggcggcgaacagccagggcgggctttatagcgacgcatcg
ccaaccaacgtcgaagacgcgtacaacgcgctcaagacgtatctgatgctaagcgacaag
cgtcacgtggaaacggctcacctgaccgaccaggttgcgcgtttctggcgcggctggctc
gaaacgaatcgcggcaacatgccccgcgacgagatgatccgcagcgcggagcgcatgatc
acgttctacctgtcacgcgtatccgacgacgactggccgatgatcgaccagaacctcggc
ctcgttgaccagacgcgcgagaacctgcgccgcgtggtgcgcggcatgccggcgcgtcag
cgtgtctacgaagagatcaaggcgcgcgcgtcgacccgtttcgcgccaatgaccattgcg
cgcatcgtcggcgaaaacaatacgtcgctcgtggcgggcagctacgcgattcccggcacg
ttcacgcgtgaagcgtggttccagtacgtgcagcctgcaatccgcgacgccgcgacgaaa
gaactgcaagcgaaagactgggtgctcaacacctccgctcacgacgacctcacgctcgaa
ggcagccctgagcagattcagaaagcactcgtcacgatgtataagaccgagtacgcaatg
cactggcagaagttcatgcaaggtattgcggtgcagagcttcggcagtttcggacaagcg
gtggacgcaatgaaccgtctcggcgatccgcaggattcgcccattcgcaaagtactcgaa
actgcttacgaccagacctcgtgggataacccttcgcttttcaatgcgaacctgaaacgc
gcgcaaagcggcgtgacgagctggttcaagcaatggttcgcgcgcgcgccgaccggtcaa
ttgaacgcgaacatcgacatcaacggtaatccggtcgaattaccgatgggcccgatcggc
caggagttctccgcgctcggccgcattgtcgtgacgggcgacaacggctcgatgctcaag
ggctacatggacacgctgtcgaaggtccgtacgcgctttaacgtcatcaagaatcagggc
gatcccgggccgggcgcgcgccagctcatgcagcagacgctcgacggcagcggctccgag
ttggccgattcgctcaagtatgtcgacgagcagatgttgacgggtctcaccgactcacaa
cgcaaggcgttgaggccgttgctggtgcgtccgctgatggccgcgtacgccgtggtgatt
caacccgcgagcgtcgaagtcaacaaggtgtggaatgcgcaggtgtatcagacgttccag
agttcgcttgcgaacaagtatccgtttgccggcgatgcgaaggtcgaagccggcgcgggc
gagattgcgcaggtgttcggacccgacggctcgattgcgaagttcgtcggcaccacgctc
gggccgctcgcggtgcgccgcggcgacacgctcaccgcccgcacatggggcgatatgggc
ctcgcgctcacgcccgacttcaccaacggcttcgcgcgttgggtcgcgccgcttgcaggc
ggcgcagcgggtgcgtcggcgggtcaaagctcggccgagccgcagacggtgttccagatt
ctgccgcaaccgagcagcggaacgaccgagtacacgctcgcgatcgacggtcagcagatg
cgctaccgcaacacgccgccacagtggaccaacttcgtgtggccgaatccgtcgggctcg
ccaggcgctacgctgaacgcgacgaccttcgatggccgcacgctgcaactcgtcaacgag
ccgggccgctacggcctggagaagctgatcaactcggcgcaacgaaagcgccgaccggat
gggaccttcgacctgtcgtggacccagggcaatgtgacggtggcggtgagcatgcgcatc
atcagcacgtcgcaagcatcgggcagcagcagcgacgccccgcaacagcagagcctgcgc
ggtttgcgcctgccgtcgtcggtagcggacgtaagtgcggcggccaactcggtcaccgca
acggccacgaacatggcggcgcccgcgtcgccagcagcgcggccggccacggccgccact
gcggtttcgaacacagggagcgcgcaatga

DBGET integrated database retrieval system