Paraburkholderia caledonica: CUJ87_20255
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Entry
CUJ87_20255 CDS
T05740
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
pcj
Paraburkholderia caledonica
Pathway
pcj00260
Glycine, serine and threonine metabolism
pcj01100
Metabolic pathways
Module
pcj_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CUJ87_20255
Enzymes [BR:
pcj01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
CUJ87_20255
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
CUJ87_20255
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
NAD_binding_8
Pyr_redox_3
DAO
FAD_binding_2
Pyr_redox
HI0933_like
NAD_binding_7
GIDA
FAD_binding_3
AlaDh_PNT_C
XdhC_C
Thi4
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AXF16752
UniProt:
A0A2Z5MHL2
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Position
PHRS4_B:660940..663942
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AA seq
1000 aa
AA seq
DB search
MSQKDRLPNGGRINRALPLTFTFNGRQYQGYQGDTLASALLANGLHFVARSWKYHRPRGI
VTAGVEEPNAVVQLETGAYTVPNARATEVELYQGLVANSVNAKPSIEKDRMAVNQKFARF
IPAGFYYKTFMWPRKFWPKYEEVIRDAAGLGKAPEQLDADRYDKCFAHCDVLVVGGGPTG
LAAAHAAALSGARVTLVDDQPELGGSLLSCRAEIDGKPALQWVHKIEDELRQMPDVKILT
RSTAFGYQDHNLVTVTQRLTDHLPVSQRKGTRELMWKIRAKRVILATGAHERPIVFGNND
LPGVMLASAVSTYLHRYAVLPGRDAVVFTNNDDGYQCALDLKAAGAQVTVIDPRAGESKG
TLPALARRYGVKVIGGAVITAAHGKLRVASVDIASYANGKTGAKQSELPCDLLAMSGGWS
PVLHLFAQSGGKAHWHNEKACFVPGKAMQAETSVGACNGDFTLGQGIRFAVDAGIEAARA
AGHIVARPNPVQVAEISEAKIEPLWLVGGRELATRGPKQFVDFQNDVSAADIFLAAREGF
ESVEHVKRYTAMGFGTDQGKLGNINGMAILAQALGKTIPETGTTTFRPNYTPVTFGTFAG
RELGEFLDPVRKTAVHEWHAENGAAFEDVGNWKRPWYYPKAGEDMHAAVARESLAVRTSV
GILDASTLGKIDIQGPDSAKLLNWVYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLA
DQHYMMTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKMC
HDIDFANAAFPFMSYREGTVAGAASRVMRISFSGELAYEVNVPANVGRAVWEALMAAGAE
FDITPYGTETMHVLRAEKGYIIVGQDTDGSMTPYDLGMGGLVAKSKDFLGKRSLTRSDTA
KPGRKQLVGLLSDDPSFVIPEGSQIVAGPFQGDTAPMLGHVTSSYYSPILKRSIAMAVVK
GGLEKIGETVTVPLSSGKQIAAKITSSVFYDSEGARQHVE
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagaccgactcccgaatggcgggcgcatcaaccgcgcattgccgcttacg
ttcacgttcaacggccgccagtatcagggttatcagggtgatacgctggcttcggcattg
ctcgccaacggcctgcacttcgttgcgcgtagctggaaatatcaccggccgcgcggcatc
gttacggcgggagtggaagagccgaacgctgtggtgcaactggaaaccggcgcctacacg
gtgccgaatgcacgcgcgaccgaagtcgagctgtatcaggggctcgtcgcgaacagcgtg
aatgcgaagccgagcatcgagaaagatcgcatggcggtcaatcagaagttcgcgcgcttc
attcctgcgggcttttactacaagaccttcatgtggccgcgcaagttctggccgaagtac
gaagaagtgatccgcgacgccgcgggtctcggcaaggcgcccgaacaactcgacgccgat
cgctacgacaagtgctttgcacattgcgacgtgctggtcgtgggcggcgggccgaccggt
ctcgcggccgcgcacgcagccgctttgtcgggcgcgcgcgtcacattggtcgacgatcag
ccggaactcggcggctcgctgctgtcgtgccgcgcggagatcgacggcaagcctgcgttg
cagtgggtgcacaagatcgaagacgaactgcggcagatgcccgacgtgaagattctcacg
cgcagcaccgcattcggttaccaggaccacaatctcgtcacggtgactcagcgtttaacc
gatcatctgcccgtgtcgcaacgcaagggcacgcgcgaactgatgtggaagatccgcgca
aaacgcgtgattctcgcaaccggcgcgcatgaacggcccatcgtgttcggcaacaacgat
ctgccgggcgtgatgctggcttcggccgtttcgacctatctgcatcgctatgcagtattg
ccgggccgcgacgccgtagtcttcacgaacaacgacgacggctatcaatgcgcgctcgac
ctgaaagcggccggcgcgcaggtgacagtgatcgatccgcgcgcgggtgaatcgaagggc
acgctgcccgcgcttgcccgccgctacggtgtgaaggtgatcggcggcgccgtcatcacc
gcggcgcacggcaaactgcgcgtggcgtcggtggatatcgcttcatatgcaaacggcaag
accggcgcgaagcaaagcgaattgccgtgcgatctgctcgcgatgtccggcggctggagc
cctgtgctgcatctgttcgcgcagtcgggcggcaaggcgcactggcataacgagaaagcc
tgcttcgtgcccggcaaggcgatgcaggcggagacgagcgtcggcgcctgcaacggcgac
ttcacgctgggccagggcatccgtttcgccgtcgatgcaggcatcgaagccgcgcgcgcc
gcaggccatatcgtcgcccggccgaatccggttcaggtcgccgaaatcagcgaagcaaag
atagagccgctctggctcgtcggcggacgcgagcttgcaacgcgcggacccaagcagttc
gtggacttccagaacgacgtgtccgcggcggatattttcctggccgcccgcgaagggttc
gagtcggttgaacacgtaaagcgttatacggcgatgggtttcggcaccgaccagggcaag
ctcggcaacatcaacggcatggcgattctcgcgcaggcgctcggcaagacgattccggag
acgggcaccaccacgttccgcccgaactacacgccggtcacgttcggcacgttcgcgggg
cgcgaactcggcgaattcctcgatccggtgcgcaagacggctgtgcatgaatggcacgcg
gagaacggcgctgctttcgaggacgtcggcaactggaagcgtccctggtattacccgaaa
gcgggtgaggacatgcacgcggccgtcgcacgcgaatcgctcgcggtgcgtaccagcgtc
ggcattctggatgcatcgacgctcggcaagatcgacattcagggtcccgattctgcgaag
ctcctgaactgggtctacacgaatccgtggagcaagctcgaagtcggcaagtgccgctat
ggcctgatgctcgacgaaaacggcatgattttcgacgacggcgtgactgtgcgcctcgcc
gatcagcactacatgatgacgaccactacaggcggcgcggcgcgcgtgctgacgtggctc
gaacgctggctgcaaactgaatggccggacatgcgcgtgcgtcttgcgtcggtcaccgat
cactgggcgactttcgccgtggtcggccccaacagccgcaaggtcttgcagaagatgtgc
cacgacatcgactttgcgaacgccgcatttcctttcatgagctatcgcgaaggcacggtc
gcgggcgcggcgtcgcgtgtgatgcgcatcagcttttccggtgaacttgcgtatgaagtg
aacgtgccggcgaacgtgggacgcgcggtgtgggaagcgttgatggccgcgggcgccgag
ttcgacatcacgccgtatggcaccgaaacgatgcacgtgttgcgtgcggagaagggctac
atcatcgtgggtcaggatacggatggctcgatgacgccttacgacctcggcatgggcggg
ctcgtcgcgaagtccaaagactttctgggcaagcgttcgctgacccgctccgacacggcg
aagccggggcgcaagcagctggtcgggctgctctccgacgatccgtctttcgtgataccg
gaaggctcgcaaattgtcgccggtccgttccagggcgacaccgcgccgatgctcggccac
gtcacgtcgagttattacagtccgattctcaagcgctcgattgcgatggccgtcgtgaag
ggcggtctcgagaagatcggcgaaacggtcacggtcccgctttcgagcggcaaacagatt
gcagcgaagatcaccagctcggtgttctacgacagcgaaggagcgcgtcaacatgtggaa
tga
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