Paraburkholderia caledonica: CUJ87_22210
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Entry
CUJ87_22210 CDS
T05740
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pcj
Paraburkholderia caledonica
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcj03032
]
CUJ87_22210
03400 DNA repair and recombination proteins [BR:
pcj03400
]
CUJ87_22210
Enzymes [BR:
pcj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CUJ87_22210
DNA replication proteins [BR:
pcj03032
]
Prokaryotic type
DNA Topoisomerases
CUJ87_22210
DNA repair and recombination proteins [BR:
pcj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CUJ87_22210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AXF17073
LinkDB
All DBs
Position
PHRS4_B:1085848..1087194
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AA seq
448 aa
AA seq
DB search
MANSTTSTTSTMQNGHASADDSVKQPATAAMPPGLRHADDSKPGYTRKREKDGFAYFDVQ
GKRIEDEAEIQRINSLAIPPAYEDVWICPDPRGHIQATGRDVRGRKQYRYHPRWRETRDA
DKYERMAEFGRALPRIRARVARDLELPGMPCDKVIAAVVRLLDTTLVRIGSVEYARENQS
YGLTTLRKKHVKVEAGQLRFKFRGKSGIEHDVTVDDQRVKRIVRRCADLPGHDLFQYLDD
DGTRRTVGSADINDYLRRASGADFTAKDYRTWAGSVYALAALRRLVCGSAAEARRHIVAT
VKEVAGLLRNTPAVCRRCYIHPAVISAFESDQLQTLPPGQSRRGLKVDEVAFAALLAHAE
KRAARLARQAGAKGRKLRETDTAESINGSITTLLKKSRTIRNEANKAAEKAGAKDSVKSS
AKTGARTARRAANADARSAPRAEKAAAS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacagcacaacgagcacaacgagcacgatgcaaaacggtcatgcatcggccgac
gacagtgtgaagcagcccgcgacagccgccatgccgcccggcttgcgccatgccgacgac
agcaagcctggctacacgcgcaagcgcgagaaagacggcttcgcgtatttcgacgtgcaa
ggaaagcgcattgaagacgaagcggagattcagcgcatcaactcgctcgcgattccgccc
gcgtacgaagacgtatggatctgtccagacccgcgcggacatattcaggcaaccggccgc
gacgtgcgcgggcgtaagcaataccgttatcacccgcgttggcgcgaaacgcgcgacgcc
gacaaatacgaacgcatggccgagttcgggcgcgcactgccgcgaatccgcgcgcgcgtc
gcccgcgacctcgaactgcccggcatgccgtgcgacaaagtgatcgcagcggtcgtgcgg
ctgctcgataccacgctggttcgtatcggcagcgtcgaatacgcacgcgaaaatcagtca
tatggactgacgacactgcgtaaaaaacacgtgaaagtggaagcgggacaattgcgcttc
aagtttcgcggcaagagcggcattgaacacgacgtgacggtggacgaccagcgcgtgaag
cgcatcgtgcggcgctgcgcggatctgccgggtcacgacctgtttcagtatctcgacgac
gacggcacacgccgcaccgtcggttcagccgacatcaacgattatctgcgccgcgcgagc
ggcgcggacttcaccgcgaaggactatcggacatgggccggcagcgtctacgcgctcgcg
gcgctgcggcgcctcgtgtgcggcagcgctgccgaagcgcggcgacatatcgtggcgacc
gtcaaggaagtcgcgggcttgctgcgcaacacgccggccgtttgccggcgttgctacatc
catcccgcagtgattagcgcattcgaaagcgaccagttgcaaaccttgccgccgggtcag
tcgcgccggggactgaaagtcgacgaggtcgcgtttgccgcattgcttgcgcatgccgag
aagcgcgccgccaggctcgcgcgtcaggcgggagcaaaaggccgcaagctgcgcgaaacc
gacaccgccgagagcatcaacggctccattacgacgttgctcaagaagtcgcgcaccatt
cgcaacgaagcgaacaaggcggcggagaaagccggtgcgaaagacagcgtcaaatcgagc
gcaaaaaccggcgcgcgaactgcccggcgagccgcaaacgcggacgcccgttccgcgccg
cgcgccgagaaggcggccgcaagttga
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