Paraburkholderia caledonica: CUJ87_25350
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Entry
CUJ87_25350 CDS
T05740
Name
(GenBank) porin
KO
K03285
general bacterial porin, GBP family
Organism
pcj
Paraburkholderia caledonica
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
CUJ87_25350
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Gene cluster
GFIT
Motif
Pfam:
Porin_4
Porin_1
Motif
Other DBs
NCBI-ProteinID:
AXF17582
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Position
PHRS4_B:1744593..1745771
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AA seq
392 aa
AA seq
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MKKSLIAGAALTALAGVAHAQSSVTLYGLIDAGLTYTNSQISGTGSGGHSNWQMTSGGIQ
YSRWGLRGAEDLGGGLKAIFNLESGFNLNNGQMASSNRIFNRLAYVGLSSHDFGTLTLGR
QTDGMVDFVAPLALTGTEYGGIHFAHPFDVDNLNDSFQINNSVKYVSPEYAGFKLGALYG
FSNQANGFANNRAYSVGLSYIWGPLNFGAGYLHLNNSAATPAQINTGGAVTDTTGSTLSG
LLTPTPVPLGALASRQQTWGAGINYSFGPAVAGFVYTQTNLTQLFLTGFSTHFQNYEGNF
RYALTPAIELAAAYTYSRAGGNGGSGAPHWNQVSALADYSLSRRTDIYLQGAWQSVSAST
NSPLGVAWINGVSAPSSTTNQVQATVGLRHRF
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtccctgatagccggcgctgcgctaaccgccttggcaggcgtcgcgcacgcg
cagagcagtgtcacactgtatggtctgatcgacgcaggcctgacctacacgaatagccag
atcagcgggacaggatcgggcggccacagcaactggcagatgaccagcggggggatccag
tacagccgctgggggctgcgtggtgcggaagatctcggcggaggattgaaggcgatcttc
aatctggaaagcggcttcaatttgaacaacggacagatggcgtccagcaatcggatcttt
aatcgtctcgcttacgtgggactgtcgagtcacgacttcggcacactgacgctgggacgt
caaaccgatggcatggtcgacttcgtggcgccgctcgcattgaccggcaccgagtacggc
gggattcactttgcccatccgttcgatgtcgacaacctcaacgattcgttccagatcaac
aactcggtcaagtatgtgagtcccgaatatgccggattcaaactgggcgctttgtacggt
ttttcgaatcaggctaacggcttcgcaaataatcgggcgtacagtgtcggtctttcgtat
atctgggggccactgaacttcggcgctggatatctgcacctgaacaattccgccgcaacg
ccggcgcagatcaacaccggtggtgcggtcaccgatacgaccggctccacgctgtccgga
ctgttgacgccgacacctgttccgttgggtgcactggctagccgccagcaaacatgggga
gcgggcatcaactactcgttcggtccggcggtagccggcttcgtgtacacccagacgaat
ttgacccaactgttcctgaccggcttcagtacccacttccagaactatgaagggaacttc
cgctatgcgttgacgcccgcgatagaactcgcggccgcttacacgtactcgcgcgcgggc
ggcaacggcggtagcggcgccccgcactggaatcaggtgagcgcgctggcggactacagc
ctgtcacgacgcacggatatctatcttcaaggagcttggcaaagtgtgagcgccagcacg
aactcgccactcggcgtggcgtggatcaacggtgtgagtgctccatcttccacgactaac
caggtacaagcgaccgtcggcctgcgccaccgtttctga
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