Paraburkholderia caledonica: CUJ87_26250
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Entry
CUJ87_26250 CDS
T05740
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
pcj
Paraburkholderia caledonica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_30
HTH_50
AAA_16
HTH_7
HTH_30
HTH_28
AAA_3
HTH_23
AAA_2
HTH_17
AAA_19
AAA
HTH_11
HTH_22
Motif
Other DBs
NCBI-ProteinID:
AXF17728
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All DBs
Position
PHRS4_B:1945530..1946906
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AA seq
458 aa
AA seq
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MAYILVVDDDNGFREGLVETLVDLGHSVDEARSGEQALEMLESTGTPFTCMFLDFRLPGM
DGLAVLDALRKTAKGQALPVVMLTGFASSDNTIGAMTLGAFDHLTKPVGRQAIQSLLARI
IASTGTSDSAANASHPFSAESAGARPRLLGVSDTLREVQKQIGRAASSEATVLFTGETGT
GKEVAARVLHDASRRSGKPFVAVNCAAIPAELLESELFGHVKGAFTGATADRPGCFAAAD
GGTLLLDEIGDMPLPMQAKLLRVIQERHITPLGSNRVIPVDIRLVAATHRNLQTMVEAGE
FREDLLYRLNIIPIALPPLRERLADILPLAEHFLAEVAKARSRELRLSLPAQHLLVGYAW
PGNVRELRNAVERAGALAPGAMITAEDLGFLNGKPDIGEPLVGTGLLEMTLPDAVETLER
ALISHALTLASNNRADAARRLGISRQTLYAKLAALKIE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcatacatactcgtagtcgacgacgacaacggctttcgcgaaggcctcgtcgaaacg
ctggttgatctcggacatagcgtggacgaggcacgctccggcgaacaggcgctggaaatg
cttgagagcacgggtacgccattcacctgcatgttcctggatttccgcctgcctggcatg
gacggcctggcagtactggacgctcttcgaaaaacggcaaagggacaggcgttgccggtg
gtgatgctcacgggtttcgcatcgagcgataacacgattggggcaatgacgctgggagcg
ttcgaccacttgaccaagccggtcggtagacaggcaatccagtcactactcgcgcgcatc
atcgcctccacgggcacgagtgattccgccgcaaacgcatcgcatccgttcagcgcggag
tcggcgggcgcgaggccccggctactcggagtaagcgacacgttgcgcgaggtgcagaaa
cagatcggacgcgcggcatcgtctgaagcaaccgtcctttttaccggtgagacaggaaca
ggaaaggaagtcgcggcgcgcgtgcttcatgacgcgtcgaggcgcagcggcaagccgttc
gtcgcagtgaattgcgcggcgattcccgccgagctcctcgaaagcgaattgttcggtcat
gtcaaaggtgcgttcacgggtgcaaccgcggaccggcccggctgctttgcagcggcagac
ggcggaaccttgctgctcgatgaaatcggcgacatgccattgcccatgcaggccaaactg
ttacgggtaatccaggaacggcacatcaccccgctcggttccaaccgcgtgattcccgtc
gacatcaggctggttgccgctacgcacagaaacttgcagaccatggtcgaggcgggggaa
ttcagggaagacctgctttaccggctgaacatcattcctatcgcgttacctccgctgcgc
gagcggctagcagatatccttccgctcgccgaacactttcttgctgaggtcgcgaaagcg
aggtcacgcgaactgcgtttgtcgctgccggcgcagcatctgctcgtgggttacgcatgg
cccggcaatgtgcgtgaactgagaaatgcagtggaacgcgccggcgcactcgctccggga
gcgatgatcacggcggaggatctcggcttcctcaatggcaagccggacattggcgagcca
ctagtgggtaccggcctgctcgagatgacgcttcccgacgcagtggaaacactcgaacgc
gcgttgatctcccacgcgttgacgcttgcgagcaataaccgtgcggatgcagcccgacgc
ctcggaatcagccgccaaacgctctatgcaaagctggccgcgctcaagatcgagtga
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