Paraburkholderia caledonica: CUJ87_26955
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Entry
CUJ87_26955 CDS
T05740
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pcj
Paraburkholderia caledonica
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcj03400
]
CUJ87_26955
Enzymes [BR:
pcj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CUJ87_26955
DNA repair and recombination proteins [BR:
pcj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CUJ87_26955
Prokaryotic type
CUJ87_26955
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
HAD
LprI
Motif
Other DBs
NCBI-ProteinID:
AXF17843
LinkDB
All DBs
Position
PHRS4_B:2100115..2101614
Genome browser
AA seq
499 aa
AA seq
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MTRVRRLNDTFDTGLVWFRRDLRSTDNAALYYALKHCERVWCVFVFDTTILQPLVDKWLT
LHPGTQAQDRRVEFILASLGELDEALRAQGGGLVVLSGDPADLVPKLANELQVDAVFANH
DYEPAAIERDEKVRERLAEAGRQWLTFKDQVIFERAELLTGQNKPFTVFTPYKNAWLKQL
TSFDLKPYPVETYANHLAKLPAKLDRHLPTLDQLGFAPSNLGELELPTGMSGARLLLDDF
LTRVDSYAERRDFPAAKGPSYLSVHLRFGTVSIRTLARLAHEMSLQPDGLGSATWLSELI
WRDFYFMILSHHPRLAGGASFKEEYDRLRWERGPEADEAFAAWCEGRTGYPLIDAAMLQL
NSTGYMHNRLRMVTASFLVKDLGVDWRLGERYFADQLNDFDFAANNGGWQWAASTGCDAQ
PYFRIFNPVTQSEKFDADGRFIKRYLPQLGKLPAKWLHAPWLAGAERLAQHDVVLGKDYP
APIVDHAQARARTLARFGK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcgtccgacgactgaacgacaccttcgacaccggcttggtctggtttcgccgc
gacctgcgcagcaccgataacgccgcgctgtactatgcgctcaagcattgcgagcgcgtg
tggtgcgtgttcgtgttcgatacgacgatcctgcaaccgctcgttgataagtggctgacg
cttcatccgggcacgcaggcgcaagatcgccgtgtcgagttcattcttgcgtcgctgggc
gaacttgacgaagcgctgcgcgctcagggtggcgggctcgtcgtgctgagcggtgatccg
gccgatctcgtcccgaagctcgccaacgagttgcaggtcgatgcggtatttgcgaaccac
gactacgaacccgccgcgatcgagcgggacgagaaggtgcgcgagcgtctcgccgaggca
ggacgccaatggctgactttcaaggatcaggtgattttcgagcgcgcggaactgttgact
ggccagaacaagccattcacggttttcacgccgtacaagaacgcgtggctcaagcaactg
acgagcttcgatctgaagccttatccggtcgaaacctacgcaaaccacctggccaagctg
ccggcaaagctagaccggcatctaccgacgctcgatcaactgggcttcgcgcccagcaat
ctcggagagctcgagttgcccaccggcatgagcggcgcgcggctgctgctcgacgacttt
ctcacgcgtgtcgacagctacgctgaacggcgggattttccggcggccaaggggcctagt
tatctgtcggtgcacttgcgctttggcaccgtgtcgattcgcacgctcgcgcggctcgct
catgagatgtctctgcaaccggacggcctgggctcagcgacgtggctctcggaactgatc
tggcgggatttttacttcatgatcctgtcgcatcaccccaggctcgcgggcggcgcgtcg
ttcaaggaagagtacgaccgtctgcgttgggagcggggcccggaagcggatgaagcgttc
gccgcatggtgcgaaggccgcaccggctatccgctgatcgacgcggccatgttgcagctc
aacagcacgggctacatgcataaccgtctgcgcatggtgaccgctagttttctggtgaag
gacctgggcgtggactggcggctcggcgagcgctatttcgccgaccaactgaacgatttc
gacttcgcggcaaataatggcggctggcaatgggcggcttcgacaggatgcgatgcccag
ccctatttccggatcttcaacccagtcacgcaatcggaaaaattcgatgccgacggccgg
ttcatcaaacgctatttgccgcagttggggaaactgccggctaaatggctccacgcgccg
tggctggcgggcgcggaacggctcgcacaacacgacgttgtgttaggcaaggattacccg
gcgccgatcgtcgaccacgcgcaggcgagagcccggacgctggctcgcttcggaaagtga
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