Paraburkholderia caledonica: CUJ87_29065
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Entry
CUJ87_29065 CDS
T05740
Name
(GenBank) peptidase C39
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
pcj
Paraburkholderia caledonica
Pathway
pcj02010
ABC transporters
pcj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CUJ87_29065
03070 Bacterial secretion system
CUJ87_29065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcj02000
]
CUJ87_29065
02044 Secretion system [BR:
pcj02044
]
CUJ87_29065
Transporters [BR:
pcj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CUJ87_29065
Secretion system [BR:
pcj02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
CUJ87_29065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
cNMP_binding
ABC_tran
SMC_N
AAA_22
AAA_25
nSTAND3
AAA_29
NB-ARC
Guanylate_cyc_2
AAA_23
NACHT
DUF87
MobB
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AXF18214
LinkDB
All DBs
Position
PHRS4_B:2573781..2576837
Genome browser
AA seq
1018 aa
AA seq
DB search
MDAPQTAPSAAEFLASVEILSPFSRDEIDRLAEYAQARFYSFGETVCSAGETADGLYVVR
SGSVRIFVEENGKETSMGVRKSGEIFADIAMLRTYVHEASVRASAKTELLFIPRAAIEPV
ITANQAALAFVASYVAINSAGGFVAQLFDLRGKLNKAELEEYVRSVGVKRVAAGKEILKQ
EARDDRRLYVVRQGEVRIVRHEEGRDYTLATLGEGEIFGEKACLMRQEQMASAVASTDAR
LLVIPERTVHFILERNPKLREVLDERIRYVDRELQRQKRLEQRRKLPLMLDLQSKAEFGE
KIIRRFALVEQAEEMDCGAACLAMICRHYSIPMTLGKLRELANVTTQGATLDSLARAGES
LGFTARGVQCTFDSLRGFDLPFIVHWEGYHYVVVYGVSTEYVWVADPALGFRKLTVEDFE
RGWSGTCLLFTGGPNLLQMSASRSPWIRFVGYLKPYKKILGHLFLATFVIQVLGVIPPLI
IQNILDGVIVHQNVSLLHLLIGGLIIANVFSQLMSSIRAYLANFMVRNMDFAMMSQFFKH
TMSLPFSFFAKRKTGDIFARFQENQTIRAFLTESTVTTALNLLMVFIYFTIMFVYNVKMT
LVLIGFVIPIMALTALATPRIKNYAREVFTASTESKSFLMEALAGVETVKGMGIERPVRL
RWEKKYAKALEVQYRAHAFNILVGLGSQLLNAATTIAILWVGANLVLAREMTIGQLIAFN
AFMGSVLGPLMGLVGLWSMLNDAGVAMERLGDVLDIEPEQRPQDLPSRVMLPELQGEISL
SGVYFRYGDNDSAYVLENISFDIKPGELVAIVGRSGSGKTTLAKLLVGFYAPSEGKMSID
GYDLGVVDKAYFRAQIGYVMQSNLLFSGSIAENIASGDDAPDRRRIEEVARMADAHAFIS
KMPLGYEQIVGERGIGLSGGQIQRLCIARALYHDPRLLVFDEATSALDSQSESNILGNMH
DILKGRTAVIIAHRLSTIMRADKILVLYEGAIVEQGRHEELIQRGGMYYQLVQKQLST
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaccccagaccgcaccgtccgccgccgagtttctcgcctcggtggaaatactg
tcgcctttttctcgcgatgagatcgaccgcctggctgaatatgcgcaggcgcgcttctat
tcgtttggcgaaacggtttgttcggcgggggagaccgccgacggcttatacgtggtccgc
tcgggctcggtgcgcatctttgtcgaggagaacggcaaggaaacaagcatgggagtgcgc
aagtcgggagaaatcttcgccgacattgcgatgctgcgaacttatgtgcatgaagcctcg
gtgcgggcgtcggcgaagaccgaattgttgttcatcccacgcgcagcaatcgagccggtg
atcacggccaatcaggccgcgctcgcttttgtcgcgagttatgtcgcaatcaattcggcc
ggcggctttgtcgcgcagttgttcgacctgcgcggcaaactgaacaaggccgagcttgaa
gaatacgtacgcagtgtgggtgtcaaacgtgtcgctgcaggcaaagagattctcaagcag
gaagcgcgcgacgaccggcgtttatacgtcgtgcgccagggtgaagtgcgcatcgttcgg
catgaagaagggcgcgactatacgctcgccacgctcggcgaaggcgaaatattcggcgag
aaagcgtgcctgatgcgccaggaacaaatggcctcggcggttgcgtccaccgatgcgcga
ctactggtgattcccgagcgcaccgttcatttcattctcgaacgcaatcccaaactgcgc
gaggtgctggacgagcgtattcgttatgtcgaccgtgagttacagcggcaaaagcggctg
gaacaacgccgtaagttgccgctaatgctggacctgcagagcaaggccgagttcggcgaa
aagataatcaggcgttttgcgttggtcgaacaggccgaagaaatggattgcggcgcggca
tgcctcgcaatgatctgccgtcactacagcattccgatgacgctcggcaaactgcgtgaa
ctcgccaatgtgacaacgcagggcgcgacgctcgacagccttgcccgtgcgggggaatcg
ctcggctttacagcgcgtggcgtgcaatgcacgttcgattcgttgcgtggattcgatcta
ccgttcatcgtgcattgggagggctatcactatgtcgtggtgtatggggtctccacagag
tacgtgtgggttgcggacccggcgctaggcttccgcaaattgaccgtagaagattttgag
cgcggctggagcggtacatgtctgctctttacgggcggcccgaacttgctgcaaatgtcg
gcgtcgcgttcaccgtggatacgctttgtcggctatctgaagccgtacaaaaaaattctc
ggtcacctgtttctcgcgacgttcgtgattcaggtactcggcgtgattccgccgctcatc
atccagaacattctggacggcgtaatcgtgcaccagaatgtgagcttgctgcatctgctg
ataggcggcctcattatcgcgaatgtattctcgcaactcatgtcgtcgattcgcgcgtac
ctcgccaatttcatggtacgcaacatggactttgcgatgatgtcgcagttcttcaagcac
acgatgtcgttgccgttctcgttttttgcaaagcgcaaaaccggcgacatattcgcgcgt
ttccaggagaatcagacgattcgcgcatttcttacggaatccaccgtcacgacagcgctg
aatctgctaatggtgttcatctacttcacgattatgttcgtctacaacgtgaagatgacg
ctcgtgctgatcggcttcgtcattccgatcatggcgctgaccgcattggccacgcctcga
atcaagaattatgcgcgcgaggtcttcaccgcatcgacggaatcgaagtcgttcctgatg
gaagcgctcgccggggtcgaaacggttaaaggcatgggcatcgagcggcccgtgcgtttg
cgctgggagaagaaatacgcgaaagcgttggaagtgcagtaccgcgcgcacgctttcaat
atcctcgttgggctcggcagtcagctgctgaacgccgcgaccacgattgcgattctctgg
gtaggcgcgaatctcgtgctcgcgcgcgagatgacaatcggccagttgattgcattcaat
gcattcatgggaagcgtgctcggccccttgatgggactggtcggattatggagcatgctc
aatgacgcgggcgtcgcaatggagcgccttggcgatgtgctggacatcgagccagaacag
aggccgcaggatctgccgtcacgcgtcatgctgcccgaactgcagggcgaaatcagcctg
agcggtgtgtacttccgctatggcgataacgattccgcttatgtgctggagaacatcagt
ttcgacatcaaacccggcgaactcgtagcgattgtcggacgcagcggctccggcaaaacg
acgctggccaagttgctcgtcggcttttacgcgccgagcgaggggaagatgtcgattgac
ggttacgacctcggcgtggtcgacaaagcctatttccgcgcgcagatcggctatgtgatg
caaagcaatctgctgttctcgggctcgattgccgagaacatagcaagcggcgacgacgca
cccgaccgccgacgcatcgaggaagtcgccagaatggcggatgcgcatgcgttcatcagc
aagatgccgctcggttatgagcagattgtcggcgagcgtggaataggcttgtccggcggc
cagatccagcggctgtgcattgcacgcgcgctgtatcacgatccacgcctgctggtattc
gacgaagccacgtctgcgctcgattcgcagtcggagagcaatattctcggcaatatgcac
gacattctgaagggccgcaccgcagtgatcattgcgcatcggctgagcaccatcatgcgt
gccgacaagattctcgtgctctatgaaggcgcaatcgtcgaacagggccgtcatgaagaa
ctgatccagcgcggtggcatgtactaccagctggttcagaaacaactgagcacgtga
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integrated database retrieval system
