Paraburkholderia caledonica: CUJ87_30290
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Entry
CUJ87_30290 CDS
T05740
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pcj
Paraburkholderia caledonica
Pathway
pcj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CUJ87_30290 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcj03400
]
CUJ87_30290 (xth)
Enzymes [BR:
pcj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CUJ87_30290 (xth)
DNA repair and recombination proteins [BR:
pcj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CUJ87_30290 (xth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AXF18423
LinkDB
All DBs
Position
PHRS4_B:2856228..2857037
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AA seq
269 aa
AA seq
DB search
MARLRIATFNINGIRSRQAALLQWLEREAPDIVCLQELKAADSAFPADALREAGYHAIWH
GQSAWNGVAILSKGEPPLESRRGLPGFEEDTHSRYLEAAVDGVLVCCLYLPNGNPQPGPK
FEYKLKWFDHLIDHTAKLLKSGHPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPESRERY
RRLVAQGWTDSLRTHFGEERVYTFWDYFRRHWDTNSGLRIDHILLSPDLAPRLRDAGVDR
WVRGEPHASDHAPTWVELDMSASRRKTRG
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaggctgcgcattgcgacattcaacatcaacggaatccgttcgcggcaggctgca
ttgctgcaatggctggagcgcgaagcgccggacattgtctgcttgcaggaactgaaggcc
gccgacagcgcgtttcccgccgacgcattgcgcgaagcgggctaccacgccatctggcac
ggccagagcgcgtggaacggcgtggcgattctgtcgaagggcgagccgccgctcgaaagc
cgccgtggcttgccgggcttcgaagaggacacgcatagccgctatctggaagcggccgtc
gacggcgtgctggtgtgctgcctctatctgcctaacggcaatccgcagcctggtccgaag
ttcgagtacaagctcaagtggttcgaccatctgatcgaccatacggcgaagctgctcaag
agcggacatccggtcgtgctggccggcgacttcaacgtcgtgcctaccgacgaagacata
tacaacccgcgctcatggctgaaagacgcgctgttgcagccggaaagccgcgaacgctac
cggcgtctcgtcgcgcagggatggactgattcgctgcgcacgcatttcggcgaggagcgg
gtctatacgttctgggattatttccgccggcattgggacaccaactccggcttgcggatc
gaccatattctgctgagcccggacctcgcgccgcgcttgcgcgacgcgggcgtggaccgc
tgggtgcgcggcgagccgcatgcgagcgaccatgcgccgacatgggtcgagctggacatg
agtgcgtcgcgtcgcaagacgcgtggctga
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