Paraburkholderia caledonica: CUJ87_31860
Help
Entry
CUJ87_31860 CDS
T05740
Name
(GenBank) adhesin
KO
K21449
trimeric autotransporter adhesin
Organism
pcj
Paraburkholderia caledonica
Brite
KEGG Orthology (KO) [BR:
pcj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcj02000
]
CUJ87_31860
Transporters [BR:
pcj02000
]
Other transporters
Pores ion channels [TC:
1
]
CUJ87_31860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
YadA_anchor
ESPR
Motif
Other DBs
NCBI-ProteinID:
AXF18937
LinkDB
All DBs
Position
pPHRS4:240863..244882
Genome browser
AA seq
1339 aa
AA seq
DB search
MNTVYRTIWNKALSAFVATSELDGSPARGRSGVAASVCDARIGGPAEGGALPLRSAYPRV
LTVLVAMGVGGWGAQVQAQASCSTAPYNFYSGSTTCVGLASISSGGGATAVGYAASSTGI
NSLSFGFQAIANGVNTIYVGARTAPGTGATAESAIGIGTDVTASGSAAIGIGVDVVSSGN
SSTAVGPLAKATGDHAIALGDSSQAVSSYTTAVGEGSRATVGNATALGAGALATAGNATA
LGVSANANGGNATAVGENATAGIGSTALGGSTNANGNGATAVGLSTQASTTHATAIGWQA
YSTALNAIYVGARTTGVGAAAESAIAIGTDVQSSGVYGIGMGIQANVAGASAVAIGSFSN
ASGNFALAFGNQAIASGVAAIAQGSGAQSTGTAAVAMGNGANASAAQAVAIGRLSNAQGA
STVAIGDSNTVAAAAGTGSIAAGHNSQVTSGTGAVALGEGQTASGNGAVAIGDPNSAIGN
GAVAAGADDTAIGNGALAMGNGNTATGQGSVALGNASQANTAGSVAIGDAAVVQGAATKS
LALGSGATASVANSVALGAASTTTTATPTAGATIGSVNYTFAGATPAGVVSVGAPGAERQ
IQNVAAGQLNGSSTDAINGSQLYATNQQVTANSTAITNIENGAGIKYFHANSTLADSSAS
GVDAIAVGGNAQSTAANAVAVGTGAAASVANSVALGAGSTTTAATPTAGATIGSVNYGFA
GTAPVGVVSVGAVGAERQIQNVAAGQLSGTSTDAVNGSQLYATNQQVTANFTAINNIEAG
AGIKYFHANSTAADSQATGTDSVAIGPLAVATGTDSFAAANGAQAQAASALALGAQSTVS
VTGGVAIGSGSLSNRAVASGTGSIAAGSYSIPFNTTDATLLGAVSFGNSTAGSATYRQLT
NVADGTQAQDAVTVRQLAGALQAFAVTPTLYFHANSTKADSLAIGTDSVAVGPATVVNGD
SGIGMGNGATVDMNAPGAVAIGESAHSGQADAMALGSGASALGAQSIAQGANANATAAGG
IAFGSAANSSAVDAVAVGAGATASLANSVALGAGSLTTVGALSSYIAYGLSSPQSSAGEV
NVGNRQITGVAAGRLGTDAVNVSQLAAVTTQLTTLIDQRTSNGGSYTSTPPGGTTVPPSS
TGANSSAGGSGAIASGSNSTAVGNGSQATGNGSTVVGTGATSTGSGSAAVGAGSNDGGRS
NVVAVGSADSTRQVINVAAGTAPTDAVNVGQLNASVNNVLTQANSYTDSQVAGLRNSLDS
YRHDADGGTATAMAVAGLPQPSGPGKSMVAIAGSVYRGQSGQALGVSTISENDHWVYKAA
VSTNTRGTYGAVVGAGYQW
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgaatacggtgtaccggacaatctggaataaggcgctcagcgcgttcgtggccacatcg
gagctggacgggtcgcccgccaggggccgctcaggtgtggcagcctcggtatgtgatgcg
cgcatcggtggacctgcggaaggcggtgctttgccactgcgcagcgcctatccacgtgtg
ctgacagtgctggtcgcaatgggggtaggcggatggggcgcgcaggtccaggctcaggcg
agctgctccacggcaccgtacaacttctacagtgggagcaccacatgtgtgggattggcg
tctatatcttctggcggcggagccactgcggtgggttatgccgcgagcagcacgggaatc
aattcattgtccttcggttttcaggccattgccaacggtgtcaacaccatctatgttggc
gcgcgtaccgctccgggtaccggagcgaccgctgagtcggcaattggcatcggtacggac
gtcaccgcgagcgggtcggcggcaattgggattggcgttgacgtggtttcaagcggcaat
tcctcgactgcagtcggtcccctggctaaagcaaccggggaccacgccatcgcgcttggc
gactcttcccaggcagtgagcagctacacaaccgctgtaggtgaaggttcacgggcaacg
gtcggcaatgccactgcgctaggtgcaggtgcgctggcgacggccggcaatgccacagcg
ctcggcgtcagtgcaaacgcaaacggaggtaatgcgaccgccgtcggtgagaatgctacg
gccggcatcggttcgactgcattaggtggcagcaccaacgcaaacggcaatggtgcgacc
gcggtaggactatcgacccaggcgagcacaacccacgcgacggcgattgggtggcaggcc
tattcgactgccctcaacgccatttacgtcggcgcgcgcacgaccggggtgggggcggcc
gcagaatcggctattgccatcggcacagacgtgcaatcttccggtgtctatggcatcgga
atgggcattcaggcaaatgtagctggcgcaagtgccgttgccatcgggtccttctcaaat
gcgtccggcaattttgcgctggctttcggcaatcaggctattgcgtcaggcgtggccgcc
attgcgcaaggatcgggtgctcaaagtacgggcacggccgctgtggcgatgggtaacggt
gccaacgcgagtgctgcccaggccgttgcgattggccgtttgtccaatgcgcaaggcgct
tcgacggtggccatcggcgacagcaacacggttgcggccgcggccggcaccggttcaata
gcggcaggccacaattctcaggtcacgagcggtaccggcgcggtcgcgctgggtgaaggt
caaacggcaagcggcaatggcgcggtggcgattggcgatccgaattcggcgatcgggaat
ggcgccgttgccgcaggtgcagacgatacggcgatcgggaatggcgccctggcgatgggc
aatggcaacaccgcaacaggccagggatccgtcgcactaggcaacgcctcacaggccaat
acagcgggctctgtcgcgattggcgatgccgcagtagtgcaaggagcagcaacgaagagc
ctcgcgctcggctctggtgcgacggcaagtgtcgcgaacagcgttgcgcttggggcagcg
tcgacaaccacaacggctacgccgactgcgggcgcgactatcggcagcgtcaactacacc
ttcgcaggggcgacgccggcgggcgtcgtgagcgtcggtgcgcctggcgccgagcgccag
atccagaacgtcgcggcgggccagttgaatggcagcagcacggatgcgattaacggctcg
cagctctatgcgaccaaccagcaggtgacggcaaactcgacagcgatcacaaacatcgag
aacggcgcggggattaaatatttccatgcgaattcgacgctggctgactcgtcggcttcc
ggcgtcgatgccatcgcagtgggaggcaacgcgcagtcgactgcagcgaatgcggtagcc
gtgggcaccggcgcagcggcaagcgtcgccaacagcgtcgcgcttggcgcgggctcgaca
acaacagccgctacgccgacggcaggcgctacgatcggcagcgttaactacggctttgcg
ggcacagcgccggtgggcgtcgtgagcgtcggggcagtgggcgccgagcgccagatccag
aatgtcgcagccggccagctaagcggaaccagcaccgacgcggtcaacggctcgcagctt
tatgcgaccaaccagcaggtgacggcgaactttaccgcgatcaacaacatcgaggccggc
gcgggcatcaagtacttccacgccaactcgaccgccgccgacagtcaggcgacaggtact
gatagcgttgcaatcggcccgctcgcggtcgcgacgggcacagacagtttcgccgcagcc
aacggcgcgcaggcacaagccgcaagcgcgcttgcgcttggcgcgcaatcgacagtgtcg
gtgacgggcggcgtggccatcggctctggctcgctgtccaatcgcgcggttgcgtctggc
accggttcgatcgccgcgggaagttactcaatcccattcaacacgaccgacgcaaccctg
ctaggtgccgtttcgtttgggaactcgaccgccggcagcgcgacctaccggcaactgacc
aacgtcgccgatggcacgcaggcgcaggatgcggttacggtcaggcagctggcaggagcg
ctacaagcctttgcggtcacgccaacgctgtacttccacgcgaattcgactaaagcggac
tctttagcgattggtaccgattcggtcgctgtcggtccggcgacggtcgtcaacggtgac
agtggcatcggaatgggcaatggcgcgaccgtcgacatgaacgcgccaggggcagtggcc
attggcgaaagtgcgcattcaggccaggcggacgcgatggcgctgggcagcggcgcgtcg
gcgctcggagcgcagtcgatcgctcagggcgccaacgcgaatgcgacagctgccggcggc
attgcattcggttcggccgcgaacagcagcgcggttgatgccgtcgccgtcggcgccggt
gcaacggcttcgcttgcaaacagtgtggcgctaggggcagggtcgctgactacggtgggt
gcattgagcagctatatcgcctatggattgagcagcccccagtcgtcagccggcgaagtc
aacgtcggcaaccgccagatcaccggcgttgctgccggacgcctcggcaccgatgctgtc
aacgtctcgcaactcgctgcagtgacaacccaactgactaccctgatcgatcagcgcacc
agcaatggcgggagttatacctcgacgccgccaggcggcaccacagtgccgccgtcgtcg
actggcgcgaattcgtctgcgggcggctcaggcgcgattgcatcgggctctaacagtact
gcagtcggcaacggctcgcaggcgactggcaacggatctacggtggtcggcactggtgcg
acgtcgacggggtccggttcggcggcggtcggcgctggcagtaacgatggcgggcgctcc
aacgttgttgctgtgggctcggcagactcgacacggcaggtaatcaatgtcgcagcgggg
actgcgcccactgacgcggtcaacgtcggacagctgaacgcaagcgtcaacaacgtgctg
acgcaggcaaacagctacacggacagtcaggtcgcaggccttcgcaacagtctggactcg
tatcgtcacgacgccgatggcggcacggcgacggcgatggccgtagccggtctgcctcag
ccctcgggccctggtaagagcatggtggcgatagcgggcagtgtctatcgtggtcagtcg
ggacaggcgcttggcgtctcgacgatttcagagaacgaccattgggtctacaaggcggcc
gtgtcaacgaatactcgaggcacctatggggcggtagtcggcgccggctaccagtggtaa
DBGET
integrated database retrieval system
