Candidatus Pantoea carbekii US: BMSBPS_0001
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Entry
BMSBPS_0001 CDS
T03853
Name
(GenBank) transcription elongation protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
pck
Candidatus Pantoea carbekii US
Brite
KEGG Orthology (KO) [BR:
pck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pck03021
]
BMSBPS_0001
03009 Ribosome biogenesis [BR:
pck03009
]
BMSBPS_0001
Transcription machinery [BR:
pck03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
BMSBPS_0001
Ribosome biogenesis [BR:
pck03009
]
Prokaryotic type
rRNA transcription factors
BMSBPS_0001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AKC31834
LinkDB
All DBs
Position
1..1488
Genome browser
AA seq
495 aa
AA seq
DB search
MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYDQEIDIRISINRRSGDFETFR
RWQVVEKVIQPTREITLEAARFENRAFNLGDYVEDQIESVIFDRITTQTAKQIIVQKVRE
AERAMILDQFRQYKGNVITGVVKKVNRDNIVLDLGSNAEAIIIREDMLPRENFRPGDRIR
GVLYDFRSETRGVQLFITRSKPEMLIELFRIEVPEIGEEIIEIKAAARDPGLRAKIAVKT
NDRRIDPIGACVGIRGGRVQAVSNELGGERIDIILWDDNPAQLVINAMAPSDVASIVVDE
DNHTMDIAVETPNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLKIKYQAEIHLAIEMFK
KHLNIDEEYATLIVKEGFSSLEELAYVPINELLEINSFDKKSIKILRERAKNALTTLDLA
KEEILGDQEPDEDLVNLDGLDRALAYRLASKGLCTLEALAEQGIDDLIDIEGLDDEKAGA
LIMAARNICWFGDNV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagagatcttagctgtagtagaagccgtttctaacgagaaagccctgccgcgt
gagaaaatcttcgaggcgttagagagcgctttagccactgcgactaaaaagaaatatgac
caagaaattgatatacgtattagtattaaccgtcgaagcggcgattttgagacttttcgt
cgttggcaggttgttgaaaaagtgatccaaccaacccgagagatcactttagaagcagct
cgttttgaaaatagagcttttaacttaggcgattatgttgaagatcaaattgaatccgta
atctttgatcgtattacgacccaaactgctaaacaaattattgtgcagaaagttcgtgaa
gctgaacgtgcaatgatacttgatcagttccgtcaatacaagggtaatgttattactggt
gtggtaaaaaaggtaaatcgcgacaatattgtattagatctgggtagtaatgctgaagct
ataattatacgagaagatatgttaccgcgcgaaaattttcgtccaggtgatcgtattcgt
ggtgtgctttatgatttccgttcagaaacacgcggtgtacaattatttattacacgttct
aaaccggaaatgttaattgaattatttcgaattgaagtacctgaaattggtgaagaaatt
attgaaataaaagcagctgctcgagatccaggcttacgtgctaagattgcagtaaaaaca
aacgatagacgtatcgatccgataggggcttgcgttggcatacgtggtggacgtgtacaa
gcggtatctaatgagcttggtggagaacgtattgatattatattatgggatgacaatccg
gctcaacttgtgattaatgctatggctccttctgatgtagcgtcaattgtagtagatgaa
gataatcatactatggatattgctgttgaaactcctaatttagcacaagcaattggtcga
aacggtcaaaatgtacgtttagcttctcagcttagcggttgggaattaaacgtaatgacc
gttgatgatttaaaaattaaatatcaagctgaaatacatttagcaattgaaatgtttaaa
aaacatctcaatattgacgaagagtatgctactttaattgtaaaagaaggcttttcttca
ttagaagaattggcatatgtacctattaacgaattattagaaattaacagttttgataaa
aaaagcattaaaattttacgtgaacgcgcaaaaaacgcattgactactttagatttggca
aaagaagaaatactaggcgatcaagaacccgatgaagatctcgtgaatcttgacggtctc
gatcgtgcgttagcatatcgtttagcgtcaaaaggtttatgcaccttagaagcgcttgca
gaacagggtattgatgacttaatagacattgaagggctggatgatgagaaggctggtgca
ctaattatggctgcacgtaatatctgctggttcggcgataatgtgtaa
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