Candidatus Pantoea carbekii US: BMSBPS_0088
Help
Entry
BMSBPS_0088 CDS
T03853
Name
(GenBank) dihydrolipoyl dehydrogenase LpdA
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pck
Candidatus Pantoea carbekii US
Pathway
pck00010
Glycolysis / Gluconeogenesis
pck00020
Citrate cycle (TCA cycle)
pck00260
Glycine, serine and threonine metabolism
pck00280
Valine, leucine and isoleucine degradation
pck00310
Lysine degradation
pck00620
Pyruvate metabolism
pck00630
Glyoxylate and dicarboxylate metabolism
pck00640
Propanoate metabolism
pck00670
One carbon pool by folate
pck00785
Lipoic acid metabolism
pck01100
Metabolic pathways
pck01110
Biosynthesis of secondary metabolites
pck01120
Microbial metabolism in diverse environments
pck01200
Carbon metabolism
pck01210
2-Oxocarboxylic acid metabolism
pck01240
Biosynthesis of cofactors
Module
pck_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pck_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pck_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pck00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
BMSBPS_0088
00020 Citrate cycle (TCA cycle)
BMSBPS_0088
00620 Pyruvate metabolism
BMSBPS_0088
00630 Glyoxylate and dicarboxylate metabolism
BMSBPS_0088
00640 Propanoate metabolism
BMSBPS_0088
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BMSBPS_0088
00280 Valine, leucine and isoleucine degradation
BMSBPS_0088
00310 Lysine degradation
BMSBPS_0088
00380 Tryptophan metabolism
BMSBPS_0088
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BMSBPS_0088
00670 One carbon pool by folate
BMSBPS_0088
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pck04147
]
BMSBPS_0088
Enzymes [BR:
pck01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
BMSBPS_0088
Exosome [BR:
pck04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
BMSBPS_0088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
FAD_binding_2
GIDA
NAD_binding_8
FAD_binding_3
DAO
Thi4
AlaDh_PNT_C
3HCDH_N
HI0933_like
Lys_Orn_oxgnase
Motif
Other DBs
NCBI-ProteinID:
AKC31916
UniProt:
U3U9E4
LinkDB
All DBs
Position
complement(117882..119303)
Genome browser
AA seq
473 aa
AA seq
DB search
MNKEIYTQVLVLGSGPAGYSAAFRCADLGLKTVIVERYSTLGGVCLNVGCIPSKALLHVA
KIIDDSSSLKENGVIFSQPIIDISKINIWKNKVIKQLTSGLVNMAKNRHIQILQGIGKFS
SSHSVIVQHEANFTQINFDNVIIATGSYPVKLPLAIHEDPRIWDSTAALRLEKIPKRLLI
IGGGIIGLEIGNIYHALGSKIDIVEICNQLISGADQDIATVFMKSINKKFNLMLETKLVN
VNLKQEGVYVELQDKTNIIKTNVYDVILVAIGRVPNTKELALDKAGVKLDKNAFICVDKQ
MRTNVQHIYAIGDIVGQPMLAHKAIHQGHIAAEVISGLKHYFDPKVIPSIAYTDPEVAWV
GLTEQIAQEKKIGYETAHFKWTASGRAIASNCSNGITKLIFNKDNHRIIGGAVVGSNGGE
LLGEIGLAIEMGCDAEDIALIIHAHPTLNESIGLAAQIFQGSITDVLNPKAKK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagatttacactcaagttttagtactcggatcaggtcctgcaggttattct
gcagcctttcgttgcgcagatttaggtttaaaaactgtaatagtagagcgctatagtact
ctcggtggtgtttgtctgaacgtaggttgcattccttccaaagccttattgcatgttgca
aaaatcattgacgatagtagtagccttaaagaaaatggagttatattttctcagcctatt
atcgacataagcaaaattaatatttggaaaaacaaagtaattaagcagctaactagtggg
cttgtaaatatggctaaaaatcgtcatattcaaatcctgcaaggtataggcaaatttagt
tcttctcatagtgtaatagtacaacacgaagctaattttactcaaattaactttgataat
gttattattgcaacaggttcttatcctgtcaaacttcctttagcaatacatgaagatcct
cgcatatgggattctactgctgctcttcgactagaaaaaataccgaaacgcttattaata
ataggagggggcataattggtcttgaaataggtaatatttaccatgcattaggttccaaa
atcgatatagttgaaatatgtaaccaattgatttctggtgcagaccaagatatagcaaca
gttttcatgaaatctattaataaaaaatttaatttaatgttagaaactaaattagttaat
gtaaatctaaaacaagaaggagtctatgttgaattacaagataaaacaaatattatcaaa
acaaatgtttacgatgtgatcttagtagcaattggtcgtgtacctaatactaaagaatta
gctttagataaagctggtgtaaaattagataaaaacgcatttatatgtgttgataagcaa
atgcgtactaatgtgcaacacatttatgctataggagatatcgttggtcaaccgatgtta
gcacataaagctatacatcaaggacatatagcagctgaagtaatatcaggcttaaaacat
tactttgacccaaaagtaattccttccatagcttatacagatccagaagtagcatgggtt
ggtttaacagagcaaatagctcaagaaaaaaagattggctacgaaacagctcattttaaa
tggactgcgtcaggtcgtgctattgcttctaattgttcgaacggtattactaaactaatc
tttaataaagataatcaccgtattattggcggggcagtagttggtagcaatggtggcgag
ctcttaggagaaattggattagccattgaaatgggttgtgatgctgaagatattgcacta
attattcatgcacatcctactttaaatgaatctattggattagcagctcaaatatttcaa
ggtagtattactgatgtgcttaatccaaaagcaaaaaaataa
DBGET
integrated database retrieval system
