Candidatus Pantoea carbekii US: BMSBPS_0141
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Entry
BMSBPS_0141 CDS
T03853
Name
(GenBank) DNA polymerase III psi subunit HolD
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
pck
Candidatus Pantoea carbekii US
Pathway
pck03030
DNA replication
pck03430
Mismatch repair
pck03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BMSBPS_0141
03430 Mismatch repair
BMSBPS_0141
03440 Homologous recombination
BMSBPS_0141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pck03032
]
BMSBPS_0141
03400 DNA repair and recombination proteins [BR:
pck03400
]
BMSBPS_0141
Enzymes [BR:
pck01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BMSBPS_0141
DNA replication proteins [BR:
pck03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BMSBPS_0141
DNA repair and recombination proteins [BR:
pck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BMSBPS_0141
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_III_psi
Motif
Other DBs
NCBI-ProteinID:
AKC31968
UniProt:
U3U9H8
LinkDB
All DBs
Position
complement(199634..200038)
Genome browser
AA seq
134 aa
AA seq
DB search
MNSRRYWIIQQTGITQYQLRFPCLLKNNNTIYLIPSAQLILVTEHILILEEPLVKDVLQA
LNFQNKDVIVLLPNQLVMLPVKVNCCAWLLGFESDHCFNGIKFTTASFNVFSNSSKQKRD
LWKQICNYLNNNLK
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaagacgctattggattatacagcaaacaggaattacacaataccagctacga
tttccgtgtttactgaaaaataataatacaatatacttaattccttctgctcaacttatt
ttagtgactgagcatattttaatattagaagaaccgttagttaaagatgtattacaagca
ctgaattttcaaaataaagatgtaattgtgttattgccaaatcaattagtcatgttaccg
gtgaaagtcaattgttgtgcttggttgctaggatttgaaagtgatcattgcttcaatggt
attaaatttactacagcttcttttaatgttttttcaaacagtagtaagcagaaacgcgat
ctatggaagcaaatatgtaattatctaaataacaatttgaaataa
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